TopicNeuro

structural connectivity

3 Seminars3 ePosters

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SeminarNeuroscienceRecording

A Game Theoretical Framework for Quantifying​ Causes in Neural Networks

Kayson Fakhar​
ICNS Hamburg
Jul 6, 2022

Which nodes in a brain network causally influence one another, and how do such interactions utilize the underlying structural connectivity? One of the fundamental goals of neuroscience is to pinpoint such causal relations. Conventionally, these relationships are established by manipulating a node while tracking changes in another node. A causal role is then assigned to the first node if this intervention led to a significant change in the state of the tracked node. In this presentation, I use a series of intuitive thought experiments to demonstrate the methodological shortcomings of the current ‘causation via manipulation’ framework. Namely, a node might causally influence another node, but how much and through which mechanistic interactions? Therefore, establishing a causal relationship, however reliable, does not provide the proper causal understanding of the system, because there often exists a wide range of causal influences that require to be adequately decomposed. To do so, I introduce a game-theoretical framework called Multi-perturbation Shapley value Analysis (MSA). Then, I present our work in which we employed MSA on an Echo State Network (ESN), quantified how much its nodes were influencing each other, and compared these measures with the underlying synaptic strength. We found that: 1. Even though the network itself was sparse, every node could causally influence other nodes. In this case, a mere elucidation of causal relationships did not provide any useful information. 2. Additionally, the full knowledge of the structural connectome did not provide a complete causal picture of the system either, since nodes frequently influenced each other indirectly, that is, via other intermediate nodes. Our results show that just elucidating causal contributions in complex networks such as the brain is not sufficient to draw mechanistic conclusions. Moreover, quantifying causal interactions requires a systematic and extensive manipulation framework. The framework put forward here benefits from employing neural network models, and in turn, provides explainability for them.

SeminarNeuroscienceRecording

A geometric framework to predict structure from function in neural networks

James Fitzgerald
Janelia Research Campus
Feb 3, 2021

The structural connectivity matrix of synaptic weights between neurons is a critical determinant of overall network function. However, quantitative links between neural network structure and function are complex and subtle. For example, many networks can give rise to similar functional responses, and the same network can function differently depending on context. Whether certain patterns of synaptic connectivity are required to generate specific network-level computations is largely unknown. Here we introduce a geometric framework for identifying synaptic connections required by steady-state responses in recurrent networks of rectified-linear neurons. Assuming that the number of specified response patterns does not exceed the number of input synapses, we analytically calculate all feedforward and recurrent connectivity matrices that can generate the specified responses from the network inputs. We then use this analytical characterization to rigorously analyze the solution space geometry and derive certainty conditions guaranteeing a non-zero synapse between neurons.

ePosterNeuroscience

Linking causal and structural connectivity in nonlinear networks

Kai Chen, Songting Li, Douglas Zhou

Bernstein Conference 2024

ePosterNeuroscience

Aberrant structural connectivity between the medial thalamus nuclei and frontal cortices in individuals with early psychosis

Julia Schulz, Felicitas Scheulen, Rebecca Hippen, Aurore Menegaux, Christian Sorg

FENS Forum 2024

ePosterNeuroscience

Experience and reactivation status determine engram synapse structural connectivity

Panthea Nemat, Rolinka J. van der Loo, August B. Smit, Sabine Spijker, Priyanka Rao-Ruiz

FENS Forum 2024

structural connectivity coverage

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