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SeminarPast EventPhysics of Life

Finding Needles in Genomic Haystacks

Robert Phillips

Fred and Nancy Morris Professor of Biophysics and Biology

California Institute of Technology

Schedule
Tuesday, September 1, 2020

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Schedule

Tuesday, September 1, 2020

12:45 AM America/Chicago

Host: Center for Theoretical Biophysics Seminar

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Event Information

Domain

Physics of Life

Original Event

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Host

Center for Theoretical Biophysics Seminar

Duration

70 minutes

Abstract

The ability to read the DNA sequences of different organisms has transformed biology in much the same way that the telescope transformed astronomy. And yet, much of the sequence found in these genomes is as enigmatic as the Rosetta Stone was to early Egyptologists. With the aim of making steps to crack the genomic Rosetta Stone, I will describe unexpected ways of using the physics of information transfer first developed at Bell Labs for thinking about telephone communications to try to decipher the meaning of the regulatory features of genomes. Specifically, I will show how we have been able to explore genes for which we know nothing about how they are regulated by using a combination of mutagenesis, deep sequencing and the physics of information, with the result that we now have falsifiable hypotheses about how those genes work. With those results in hand, I will show how simple tools from statistical physics can be used to predict the level of expression of different genes, followed by a description of precision measurements used to test those predictions. Bringing the two threads of the talk together, I will think about next steps in reading and writing genomes at will.

Topics

DNAdeep sequencinggene expressiongenomic sequenceshypothesesinformation transfermutagenesisprecision measurementsregulatory featuresstatistical physics

About the Speaker

Robert Phillips

Fred and Nancy Morris Professor of Biophysics and Biology

California Institute of Technology

Contact & Resources

No additional contact information available

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