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Simba Behavioral Neuroscientists

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Seminar✓ Recording AvailableOpen Source

SimBA for Behavioral Neuroscientists

Sam A. Golden

Dr.

University of Washington, Department of Biological Structure

Schedule
Thursday, July 15, 2021

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Thursday, July 15, 2021

12:00 PM America/Argentina/Buenos_Aires

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Host: Open Source Neuro

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Open Source Neuro

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Abstract

Several excellent computational frameworks exist that enable high-throughput and consistent tracking of freely moving unmarked animals. SimBA introduce and distribute a plug-and play pipeline that enables users to use these pose-estimation approaches in combination with behavioral annotation for the generation of supervised machine-learning behavioral predictive classifiers. SimBA was developed for the analysis of complex social behaviors, but includes the flexibility for users to generate predictive classifiers across other behavioral modalities with minimal effort and no specialized computational background. SimBA has a variety of extended functions for large scale batch video pre-processing, generating descriptive statistics from movement features, and interactive modules for user-defined regions of interest and visualizing classification probabilities and movement patterns.

Topics

SimBAbehaviourbehavioural annotationbehavioural neurosciencedeeplabcutethologymachine-learningmovement featurespose-estimationpredictive classifierssocial behavioursvideo pre-processing

About the Speaker

Sam A. Golden

Dr.

University of Washington, Department of Biological Structure

Contact & Resources

Personal Website

open-neuroscience.com/en/post/simple_behavioral_analysis_simba/

@GoldenNeuron

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twitter.com/GoldenNeuron

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