Australian BioCommons

Genome annotation connects assembled sequences with functional information, but many sequenced genomes remain unannotated and large-scale annotation is difficult to standardise and evaluate. The Australian Tree of Life Bioinformatics Group and international biodiversity researchers are working to automate genome assembly and annotation so that researchers without specialist bioinformatics expertise can use them. During an industry placement hosted by the Australian Genome Research Facility with Australian BioCommons, University of Queensland PhD candidate Jane Tung compared current annotation pipelines across a range of genomes to identify scalable approaches for Australian reference genomes. This webinar presents the benchmarking findings and examines how they can inform and streamline genome assembly and annotation workflows. It is intended for researchers using genomes and genome annotations.

Tim Ebbels presents interpretable machine-learning models for metabolomics and multi-omics using pathway and chemical-class scores. Sparse coverage of the metabolome and uncertain annotations make conventional results difficult to interpret; pathway-based features aim to connect model output directly to biological function. The webinar examines applications from multi-assay mass spectrometry and multi-omics integration to single-cell and mass-spectrometry imaging, discusses methodological challenges and attempts to resolve them, and demonstrates how these approaches can clarify complex biological signals. Online via Zoom. Free for interested life scientists and bioinformaticians, with advance registration required through the Australian BioCommons event page. Tuesday 13 October, 16:00–17:00 AEDT (Australia/Melbourne), equivalent to 05:00–06:00 UTC. The event is subject to the BioCommons Code of Conduct and may be recorded.

Peter Meikle, Bernie Pope and Tingting Wang present the Australian Cardiovascular disease Data Commons (ACDC). Some heart attacks occur without established risk factors, and repeat events remain common despite optimal treatment. ACDC addresses this gap by securely pooling multi-omics, imaging and longitudinal outcomes from approximately 400,000 people in 18 Australian cohorts. The webinar explains cloud infrastructure, data harmonisation and federated standards based on Gen3; how integrated genomic, multi-omics and imaging cohorts support new risk markers and polygenic risk-score testing; and how the platform can move diagnostic research towards clinical practice. Meikle and Wang are at the Baker Heart and Diabetes Institute; Pope is at Australian BioCommons. Online via Zoom. Wednesday 30 September 2026, 12:00–13:00 AEST (Australia/Melbourne; UTC+10). Free, with advance registration through the official event page. Intended for life scientists, bioinformaticians, cardiovascular clinicians, data custodians and medical data scientists. Parts may be recorded; the Australian BioCommons Code of Conduct applies. Organized by Australian BioCommons.