Topic: ephys-to-histology alignment

There are many great open-source tools available for the processing of neuronal data acquired using Neuropixels probes. Each of these tools, however, focus on a part of the entire pipeline from raw data to spike- and event times. For example, SpikeInterface is an incredibly useful Python module for pre-processing and spike sorting of individual recordings. However, there are more steps in between raw data and spikes, such as synchronization of spike times between probes and histological reconstruction of probe insertions. Large collaborations, like the International Brain Laboratory (IBL), hav