TopicNeuro

bioinformatics

3 Seminars1 Position

Latest

PositionNeuroscience

Dr Guillermina López-Bendito

Institute of Neuroscience of Alicante (CSIC-UMH)
Spain, Alicante
Jan 12, 2026

The López-Bendito Lab is interested in understanding and uncovering the principles underlying the development of sensory circuits with emphasis on the role of the thalamus in the development of cortical sensory maps. Furthermore, we are developing strategies for circuit restoration in sensory deprived mice. We are seeking for two (2) highly motivated postdoctoral scientists to investigate the cellular and molecular mechanisms involved in sensory circuit glia-to-neuron reprogramming. This 3-years project funded by La Caixa Foundation aims to understand the rules for region-specific reprogramming with the ultimate goal of recovery sensory thalamocortical circuits in sensory deprived mice. Applicants should have a proven track record and an independent working style.

SeminarNeuroscience

The role of CNS microglia in health and disease

Kyrargyri Vassiliki
Department of Immunology, Laboratory of Molecular Genetics, Hellenic Pasteur Institute, Athens, Greece
Oct 25, 2023

Microglia are the resident CNS macrophages of the brain parenchyma. They have many and opposing roles in health and disease, ranging from inflammatory to anti-inflammatory and protective functions, depending on the developmental stage and the disease context. In Multiple Sclerosis, microglia are involved to important hallmarks of the disease, such as inflammation, demyelination, axonal damage and remyelination, however the exact mechanisms controlling their transformation towards a protective or devastating phenotype during the disease progression remains largely unknown until now. We wish to understand how brain microglia respond to demyelinating insults and how their behaviour changes in recovery. To do so we developed a novel histopathological analysis approach in 3D and a cell-based analysis tool that when applied in the cuprizone model of demyelination revealed region- and disease- dependent changes in microglial dynamics in the brain grey matter during demyelination and remyelination. We now use similar approaches with the aim to unravel sensitive changes in microglial dynamics during neuroinflammation in the EAE model. Furthermore, we employ constitutive knockout and tamoxifen-inducible gene-targeting approaches, immunological techniques, genetics and bioinformatics and currently seek to clarify the specific role of the brain resident microglial NF-κB molecular pathway versus other tissue macrophages in EAE.

SeminarNeuroscienceRecording

Linking GWAS to pharmacological treatments for psychiatric disorders

Aurina Arnatkeviciute
Monash University
Aug 19, 2022

Genome-wide association studies (GWAS) have identified multiple disease-associated genetic variations across different psychiatric disorders raising the question of how these genetic variants relate to the corresponding pharmacological treatments. In this talk, I will outline our work investigating whether functional information from a range of open bioinformatics datasets such as protein interaction network (PPI), brain eQTL, and gene expression pattern across the brain can uncover the relationship between GWAS-identified genetic variation and the genes targeted by current drugs for psychiatric disorders. Focusing on four psychiatric disorders---ADHD, bipolar disorder, schizophrenia, and major depressive disorder---we assess relationships between the gene targets of drug treatments and GWAS hits and show that while incorporating information derived from functional bioinformatics data, such as the PPI network and spatial gene expression, can reveal links for bipolar disorder, the overall correspondence between treatment targets and GWAS-implicated genes in psychiatric disorders rarely exceeds null expectations. This relatively low degree of correspondence across modalities suggests that the genetic mechanisms driving the risk for psychiatric disorders may be distinct from the pathophysiological mechanisms used for targeting symptom manifestations through pharmacological treatments and that novel approaches for understanding and treating psychiatric disorders may be required.

bioinformatics coverage

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Seminar3
Position1
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