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Design of new protein functions using deep learning

Structural Biology seminar by David Baker, University of Washington; Howard Hughes Medical Institute, USA

Hosted by Paul G. Allen School of Computer Science & Engineering, University of Washington

Thursday 15:30–16:29 Los Angeles (GMT-8)

Recording available

Seattle, WA, USA

Recording

Abstract

David Baker presents recent advances in designing proteins for functions that natural evolution has not been required to solve. The approach begins with a desired structure or activity and uses deep learning to propose amino acid sequences expected to realise it. The resulting designs are translated into synthetic genes, produced as proteins and tested experimentally. The lecture connects computational design with laboratory characterisation, explaining how the combination can create new molecular functions relevant to medicine, technology and sustainability. Its focus is the construction and evaluation of proteins from scratch, extending the protein-design research recognised by the 2024 chemistry prize.

Topics

protein designdeep learning methodsfunctional proteinsexperimental validation

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