World Wide relies on analytics signals to operate securely and keep research services available. Accept to continue, or leave the site.
Review the Privacy Policy for details about analytics processing.
Dr.
Hokkaido University
Showing your local timezone
Schedule
Sunday, August 1, 2021
9:00 AM America/Los_Angeles
Seminar location
No geocoded details are available for this content yet.
Recording provided by the organiser.
Format
Recorded Seminar
Recording
Available
Host
SLAAM by UC Merced
Seminar location
No geocoded details are available for this content yet.
Dictyostelium Discoideum (DD) are a fascinating single-cellular organism. When nutrients are plentiful, the DD cells act as autonomous individuals foraging their local vicinity. At the onset of starvation, a few (<0.1%) cells begin communicating with others by emitting a spike in the chemoattractant protein cyclic-AMP. Nearby cells sense the chemical gradient and respond by moving toward it and emitting a cyclic-AMP spike of their own. Cyclic-AMP activity increases over time, and eventually a spiral wave emerges, attracting hundreds of thousands of cells to an aggregation center. How DD cells go from autonomous individuals to a collective entity remains an open question for more than 60 years--a question whose answer would shed light on the emergence of multi-cellular life. Recently, trans-scale imaging has allowed the ability to sense the cyclic-AMP activity at both cell and colony levels. Using both the images as well as toy simulation models, this research aims to clarify whether the activity at the colony level is in fact initiated by a few cells, which may be deemed "leader" or "pacemaker" cells. In this talk, I will demonstrate the use of information-theoretic techniques to classify leaders and followers based on trajectory data, as well as to infer the domain of interaction of leader cells. We validate the techniques on toy models where leaders and followers are known, and then try to answer the question in real data--do leader cells drive collective behavior in DD colonies?
Sulimon Sattari
Dr.
Hokkaido University
open source
When meta-research (research on research) makes an observation or points out a problem (such as a flaw in methodology), the project should be repeated later to determine whether the problem remains. F
neuro
neuro
Pluripotent cells, including embryonic stem (ES) and induced pluripotent stem (iPS) cells, are used to investigate the genetic and epigenetic underpinnings of human diseases such as Parkinson’s, Alzhe