Do leader cells drive collective behavior in Dictyostelium Discoideum amoeba colonies?
Cell Biology, Computational Biology, Systems Biology and seminar by Dr. Sulimon Sattari, Hokkaido University
Hosted by SLAAM by UC Merced
Sunday 17:00–18:10 Los Angeles (GMT-7)
Recording available
Abstract
Dictyostelium Discoideum (DD) are a fascinating single-cellular organism. When nutrients are plentiful, the DD cells act as autonomous individuals foraging their local vicinity. At the onset of starvation, a few (<0.1%) cells begin communicating with others by emitting a spike in the chemoattractant protein cyclic-AMP. Nearby cells sense the chemical gradient and respond by moving toward it and emitting a cyclic-AMP spike of their own. Cyclic-AMP activity increases over time, and eventually a spiral wave emerges, attracting hundreds of thousands of cells to an aggregation center. How DD cells go from autonomous individuals to a collective entity remains an open question for more than 60 years--a question whose answer would shed light on the emergence of multi-cellular life. Recently, trans-scale imaging has allowed the ability to sense the cyclic-AMP activity at both cell and colony levels. Using both the images as well as toy simulation models, this research aims to clarify whether the activity at the colony level is in fact initiated by a few cells, which may be deemed "leader" or "pacemaker" cells. In this talk, I will demonstrate the use of information-theoretic techniques to classify leaders and followers based on trajectory data, as well as to infer the domain of interaction of leader cells. We validate the techniques on toy models where leaders and followers are known, and then try to answer the question in real data--do leader cells drive collective behavior in DD colonies?
Topics
More from SLAAM by UC Merced
All talks- Video page · Aug 15, 2022Alexander Mietke
Magnetic Handshake Materials
Video page · Aug 1, 2022Chrisy Xiyu DuActive mechanics of sea star oocytes
Video page · Jul 18, 2022Peter FosterMembrane mechanics meet minimal manifolds
Video page · Jun 20, 2022Leroy Jia