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In Vivo Imaging

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TopicWorld Wide

in vivo imaging

Discover seminars, jobs, and research tagged with in vivo imaging across World Wide.
15 curated items6 Seminars5 Positions4 ePosters
Updated 1 day ago
15 items · in vivo imaging
15 results
Position

Department of Integrative Biology and Physiology

University of California Los Angeles
Los Angeles, CA
Dec 5, 2025

Assistant Professor

Position

Prof. Tommaso Patriarchi

University of Zurich
Zurich, Switzerland
Dec 5, 2025

Our lab is looking for a highly motivated, ambitious, and hard-working research assistant to contribute and lead exciting projects related to the development and/or in vivo application (in mouse brain) of state of the art genetically encoded fluorescent sensors to track the release properties of neurotransmitters and neuromodulators in the context of natural and/or maladaptive behaviors.

PositionDevelopmental Neuroscience

Guillermina Lopez Bendito

Institute of Neuroscience
Alicante, Spain
Dec 5, 2025

We are seeking for highly motivated postdoctoral neuroscientists with a strong background in neuroscience to study the functional development of sensory circuits and spontaneous activity programs in mice using in vivo meso-scale and two-photon calcium imaging, and in vivo electrophysiology.

Position

Dr Shuzo Sakata

University of Strathclyde
Glasgow, UK
Dec 5, 2025

A fully funded 3-year PhD studentship is available to work with Dr Shuzo Sakata at University of Strathclyde in Glasgow, UK. Our group has been investigating state-dependent information processing in the brain by combining a range of techniques, including in vivo high-density electrophysiological recording, Ca2+ imaging, optogenetics, behavioural analysis and computational approaches. In this PhD project, we will investigate whether and how manipulating brain states can modify Alzheimer’s disease pathology in mice by utilising state-of-the-art neurophotonic technologies. This project is funded by the Strathclyde Research Excellence Award scheme and will be aligned with an international consortium project, DEEPER, funded from the EU’s Horizon 2020 (https://www.deeperproject.eu/) by closely collaborating with Professor Keith Mathieson at the Institute of Photonics.

Position

Dr. Katie Kindt

National Institutes of Health
Bethesda, MD, USA
Dec 5, 2025

A staff scientist position is available within the Section on Sensory Cell Development and Function at the National Institute on Deafness and Other Communication Disorders (NIDCD), at the National Institutes of Health (NIH). We are located in the multidisciplinary Neuroscience Research Center (Building 35A) in Bethesda, Maryland just outside of Washington D.C. Our group utilizes the zebrafish system to study hair cells, the specialized mechanoreceptors that are required to reliably transmit auditory and vestibular information to the brain. Specifically, we use this in vivo model to investigate the function and assembly of the hair cell system. Our work uses this relevant model by combining powerful genetics, functional and time-lapse imaging, electrophysiology, and behavioral analyses to comprehensively dissect the molecular and functional requirements underlying the assembly and function of hair cell systems in vivo. The main questions we are currently asking include: 1) how do collections of sensory cells, synapses, and neurons coordinate to encode sensory information; 2) how does sensory activity impact circuit assembly, function and health; and 3) what molecules are required to set up sensory function and synapse specificity?

SeminarNeuroscienceRecording

Astrocytes encode complex behaviorally relevant information

Katharina Merten
Nimmerjahn Lab, Salk Institute
Jan 25, 2022

While it is generally accepted that neurons control complex behavior and brain computation, the role of non-neuronal cells in this context remains unclear. Astrocytes, glial cells of the central nervous system, exhibit complex forms of chemical excitation, most prominently calcium transients, evoked by local and projection neuron activity. In this talk, I will provide mechanistic links between astrocytes’ spatiotemporally complex activity patterns, neuronal molecular signaling, and behavior. Using a visual detection task, in vivo calcium imaging, robust statistical analyses, and machine learning approaches, my work shows that cortical astrocytes encode the animal's decision, reward, performance level, and sensory properties. Behavioral context and motor activity-related parameters strongly impact astrocyte responses. Error analysis confirms that astrocytes carry behaviorally relevant information, supporting astrocytes' complementary role to neuronal coding beyond their established homeostatic and metabolic roles.

SeminarNeuroscienceRecording

Optogenetic silencing of synaptic transmission with a mosquito rhodopsin

Ofer Yizhar
Weizmann Institute
May 26, 2021

Long-range projections link distant circuits in the brain, allowing efficient transfer of information between regions and synchronization of distributed patterns of neural activity. Understanding the functional roles of defined neuronal projection pathways requires temporally precise manipulation of their activity, and optogenetic tools appear to be an obvious choice for such experiments. However, we and others have previously shown that commonly-used inhibitory optogenetic tools have low efficacy and off-target effects when applied to presynaptic terminals. In my talk, I will present a new solution to this problem: a targeting-enhanced mosquito homologue of the vertebrate encephalopsin (eOPN3), which upon activation can effectively suppress synaptic transmission through the Gi/o signaling pathway. Brief illumination of presynaptic terminals expressing eOPN3 triggers a lasting suppression of synaptic output that recovers spontaneously within minutes in vitro and in vivo. The efficacy of eOPN3 in suppressing presynaptic release opens new avenues for functional interrogation of long-range neuronal circuits in vivo.

SeminarNeuroscienceRecording

Imaging the influences of sensory experience on visual system circuit development

Ed Ruthazer
Montreal Neurological Institute-Hospita
May 16, 2021

Using a combination of in vivo imaging of neuronal circuit functional and structural dynamics, we have investigated the mechanisms by which patterned neural activity and sensory experience alter connectivity in the developing brain. We have identified, in addition to the long-hypothesized Hebbian structural plasticity mechanisms, a kind of plasticity induced by the absence of correlated firing that we dubbed “Stentian plasticity”. In the talk I will discuss the phenomenology and some mechanistic insights regarding Stentian mechanisms in brain development. Further, I will show how glia may have a key role in circuit remodeling during development. These studies have led us to an appreciation of the importance of neuron-glia interactions in early development and the ability of patterned activity to guide circuit wiring.

SeminarNeuroscience

The interaction of sensory and motor information to shape neuronal representations in mouse cortical networks

Janelle Pakan
DZNE Magdeburg
Dec 3, 2020

The neurons in our brain never function in isolation; they are organized into complex circuits which perform highly specialized information processing tasks and transfer information through large neuronal networks. The aim of Janelle Pakan's research group is to better understand how neural circuits function during the transformation of information from sensory perception to behavioural output. Importantly, they also aim to further understand the cell-type specific processes that interrupt the flow of information through neural circuits in neurodegenerative disorders with dementia. The Pakan group utilizes innovative neuroanatomical tracing techniques, advanced in vivo two-photon imaging, and genetically targeted manipulations of neuronal activity to investigate the cell-type specific microcircuitry of the cerebral cortex, the macrocircuitry of cortical output to subcortical structures, and the functional circuitry underlying processes of sensory perception and motor behaviour.

SeminarNeuroscienceRecording

Vagal sensory neurons that guard the airways

Stephen Liberles
Harvard Medical School, Boston, MA, USA
Jun 21, 2020

The vagus nerve contains a diversity of sensory neurons that detect peripheral stimuli such as blood pressure changes at the aortic arch, lung expansion during breathing, meal-induced stomach distension, and chemotherapeutics that induce nausea. Underlying vagal sensory mechanisms are largely unresolved at a molecular level, presenting tremendously important problems in sensory biology. We charted vagal sensory neurons by single cell RNA sequencing, identifying novel cell surface receptors and classifying a staggering diversity of sensory neuron types. We then generated a collection of ires-Cre knock-in mice to target each neuron type, and adapted genetic tools for Cre-based anatomical mapping, in vivo imaging, targeted ablation, and optogenetic control of vagal neuron activity. We found different sensory neuron types that innervate the lung and exert powerful effects on breathing, others that monitor and control the digestive system, and yet others that innervate that innervate the larynx and protect the airways. Together with Ardem Patapoutian, we also identified a critical role for Piezo mechanoreceptors in the sensation of airway stretch, which underlies a classical respiratory reflex termed the Hering-Breuer inspiratory reflex, as well as in the neuronal sensation of blood pressure and the baroreceptor reflex.

ePoster

3-Photon in vivo imaging reveals breakdown of microglia surveillance upon glioma invasion in the corpus callosum

Felix Nebeling, Falko Fuhrmann, Manuel Mittag, A Deli, Miriam Stork, Melanie Clements, Claudia Garcia Diaz, Simona Parrinello, Paolo Salomoni, Ulrich Herrlinger, Martin Fuhrmann

FENS Forum 2024

ePoster

A new family of multicolor genetically encoded indicators for fast, sensitive, and selective in vivo imaging of norepinephrine

Zacharoula Kagiampaki-Baimpaki, Valentin Rohner, Cedric Kiss, Sebastiano Curreli, Alexander Dieter, Maria Wilhelm, Masaya Harada, Sian N. Duss, Jan Dernic, Musadiq A. Bhat, Xuehan Zhou, Luca Ravotto, Tim Ziebarth, Laura Moreno Wasielewski, Latife Sönmez, Dietmar Benke, Bruno Weber, Johannes Bohacek, Andreas Reiner, J. Simon Wiegert, Tommaso Fellin, Tommaso Patriarchi

FENS Forum 2024

ePoster

Three-photon in vivo imaging of neurons and glia in the medial prefrontal cortex at unprecedented depth with sub-cellular resolution

Falko Fuhrmann, Felix Nebeling, Fabrizio Musacchio, Manuel Mittag, Stefanie Poll, Monika Müller, Eleonora Ambrad Giovannetti, Nicole Reichenbach, Sanjeev Kaushalya, Hans Fried, Stefan Linden, Gabor Petzold, Martin Fuhrmann

FENS Forum 2024

ePoster

In vivo imaging of CB1-dependent modulation of brain metabolism

Tommaso Dalla Tor, Paula Sotres Gomez, Astrid Cannich, Filippo Drago, Ignacio Fernández-Moncada, Giovanni Marsicano

FENS Forum 2024