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Topic: behavioral features

ePoster
2 ePosters

In Neuroscience

ePoster · Neuroscience

New tools for recording and interpreting brain-wide activity in C. elegans

Jungsoo Kim, Adam Atanas, Ziyu Wang, Eric Bueno, McCoy Becker, Di Kang, Jungyeon Park, Cassi Estrem, Talya Kramer, Saba Baskoylu, Vikash Mansingkha, Steven Flavell · COSYNE 2023

Sun, Mar 12, 2023

Recent studies have shown that behavioral information is richly distributed across the brain, but how individual neurons across the brain encode behavior is largely unknown. However, it is challenging to record/interpret high quality single neuron traces across the brain. Here, we describe new hardware/software and analytical tools to address this. We engineered a microscope to record brain-wide activity and behavior of freely-moving C. elegans, wrote new image analysis software, and developed a probabilistic encoder model to delineate how each neuron encodes specific behavioral features. Extr

ePoster · Neuroscience

Semi-supervised sequence modeling for improved behavior segmentation

Matt Whiteway,Anqi Wu,Mia Bramel,Kelly Buchanan,Catherine Chen,Neeli Mishra,Evan Schaffer,Andres Villegas,The International Brain Laboratory,Liam Paninski · COSYNE 2022

Sat, Mar 19, 2022

A popular approach to quantifying animal behavior from video data is through behavioral segmentation, wherein video frames are labeled as containing one or more discrete behavior classes, such as grooming or rearing. These behaviors are often manually labeled, which is time consuming and error prone. An alternative approach is to train a sequence model which learns to map behavioral features extracted from video frames to discrete behaviors, although supervised models still require manually labeled examples to learn from. In order to reduce the need for expensive manual labels in this supervis