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Circuit dynamics

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Modern experimental techniques now reveal the structure and function of neural circuits at unprecedented scale and resolution. How can we use this wealth of data to understand how cells and circuits implement computations underlying behaviour? Achieving this goal requires models that are consistent with biophysical mechanisms and circuit dynamics, yet flexible enough to capture behaviourally relevant computations. We develop simulation-based machine learning methods that address this challenge. I will show how these approaches—in combination with connectomic measurements—make it possible to bu

Wed, Dec 17, 2025 · 16:00 UTC

Seminar · Computational Neuroscience

Relating circuit dynamics to computation: robustness and dimension-specific computation in cortical dynamics

Shaul Druckmann · Stanford department of Neurobiology and department of Psychiatry and Behavioral Sciences

Neural dynamics represent the hard-to-interpret substrate of circuit computations. Advances in large-scale recordings have highlighted the sheer spatiotemporal complexity of circuit dynamics within and across circuits, portraying in detail the difficulty of interpreting such dynamics and relating it to computation. Indeed, even in extremely simplified experimental conditions, one observes high-dimensional temporal dynamics in the relevant circuits. This complexity can be potentially addressed by the notion that not all changes in population activity have equal meaning, i.e., a small change in

Wed, Apr 23, 2025 · 15:00 UTC

Seminar · Computational Neuroscience

Decomposed linear dynamical systems for C. elegans functional connectivity

Eva Yezerets, Noga Mudrik, Yenho Chen et al. · COSYNE 2023

Recent work has indicated that functional connections between C. elegans neurons can be clustered by their role in behavior, i.e. forward vs. reverse crawling vs. turning (Linderman et al. 2019). Furthermore they show how data-driven dynamical systems, e.g., the recurrent switching linear dynamical systems (rSLDS), can be learned in an unsupervised way from whole-brain recordings (Kato et al. 2015). However, these approaches ascribe a discrete overall state to the system at each time point, potentially missing different dimensions of variability in the data. For example, such models cannot fle

ePoster · Computational Neuroscience

…how the moment by moment collective dynamics of the brain instantiates learning and cognition. However, efficiently extracting such a conceptual understanding from large, high dimensional neural datasets requires concomitant advances in theoretically driven experimental design, data analysis, and neural circuit modeling. We will discuss how the modern frameworks of high dimensional statistics and deep learning can aid us in this

Thu, Jun 17, 2021 · 17:00 UTC

Seminar · Computational Neuroscience