Introducing YAPiC: An Open Source tool for biologists to perform complex image segmentation with deep learning
Christoph Möhl · Core Research Facilities, German Center of Neurodegenerative Diseases (DZNE) Bonn.
Fri, Aug 27, 2021 · 07:00 UTC
Robust detection of biological structures such as neuronal dendrites in brightfield micrographs, tumor tissue in histological slides, or pathological brain regions in MRI scans is a fundamental task in bio-image analysis. Detection of those structures requests complex decision making which is often impossible with current image analysis software, and therefore typically executed by humans in a tedious and time-consuming manual procedure. Supervised pixel classification based on Deep Convolutional Neural Networks (DNNs) is currently emerging as the most promising technique to solve such complex