Topic: Neuronal dynamics

Seminar
3 seminars
SeminarComputational Neuroscience

Quasicriticality and the quest for a framework of neuronal dynamics

Leandro Jonathan Fosque
Beggs lab, IU Bloomington
May 3, 2023

Critical phenomena abound in nature, from forest fires and earthquakes to avalanches in sand and neuronal activity. Since the 2003 publication by Beggs & Plenz on neuronal avalanches, a growing body of work suggests that the brain homeostatically regulates itself to operate near a critical point where information processing is optimal. At this critical point, incoming activity is neither amplified (supercritical) nor damped (subcritical), but approximately preserved as it passes through neural networks. Departures from the critical point have been associated with conditions of poor neurological health like epilepsy, Alzheimer's disease, and depression. One complication that arises from this picture is that the critical point assumes no external input. But, biological neural networks are constantly bombarded by external input. How is then the brain able to homeostatically adapt near the critical point? We’ll see that the theory of quasicriticality, an organizing principle for brain dynamics, can account for this paradoxical situation. As external stimuli drive the cortex, quasicriticality predicts a departure from criticality while maintaining optimal properties for information transmission. We’ll see that simulations and experimental data confirm these predictions and describe new ones that could be tested soon. More importantly, we will see how this organizing principle could help in the search for biomarkers that could soon be tested in clinical studies.

SeminarComputational NeuroscienceRecording

Bridging the gap between artificial models and cortical circuits

C. B. Currin
IST Austria
Nov 10, 2022

Artificial neural networks simplify complex biological circuits into tractable models for computational exploration and experimentation. However, the simplification of artificial models also undermines their applicability to real brain dynamics. Typical efforts to address this mismatch add complexity to increasingly unwieldy models. Here, we take a different approach; by reducing the complexity of a biological cortical culture, we aim to distil the essential factors of neuronal dynamics and plasticity. We leverage recent advances in growing neurons from human induced pluripotent stem cells (hiPSCs) to analyse ex vivo cortical cultures with only two distinct excitatory and inhibitory neuron populations. Over 6 weeks of development, we record from thousands of neurons using high-density microelectrode arrays (HD-MEAs) that allow access to individual neurons and the broader population dynamics. We compare these dynamics to two-population artificial networks of single-compartment neurons with random sparse connections and show that they produce similar dynamics. Specifically, our model captures the firing and bursting statistics of the cultures. Moreover, tightly integrating models and cultures allows us to evaluate the impact of changing architectures over weeks of development, with and without external stimuli. Broadly, the use of simplified cortical cultures enables us to use the repertoire of theoretical neuroscience techniques established over the past decades on artificial network models. Our approach of deriving neural networks from human cells also allows us, for the first time, to directly compare neural dynamics of disease and control. We found that cultures e.g. from epilepsy patients tended to have increasingly more avalanches of synchronous activity over weeks of development, in contrast to the control cultures. Next, we will test possible interventions, in silico and in vitro, in a drive for personalised approaches to medical care. This work starts bridging an important theoretical-experimental neuroscience gap for advancing our understanding of mammalian neuron dynamics.

SeminarComputational NeuroscienceRecording

Interacting synapses stabilise both learning and neuronal dynamics in biological networks

Tim Vogels
IST Austria
Mar 3, 2021

Distinct synapses influence one another when they undergo changes, with unclear consequences for neuronal dynamics and function. Here we show that synapses can interact such that excitatory currents are naturally normalised and balanced by inhibitory inputs. This happens when classical spike-timing dependent synaptic plasticity rules are extended by additional mechanisms that incorporate the influence of neighbouring synaptic currents and regulate the amplitude of efficacy changes accordingly. The resulting control of excitatory plasticity by inhibitory activation, and vice versa, gives rise to quick and long-lasting memories as seen experimentally in receptive field plasticity paradigms. In models with additional dendritic structure, we observe experimentally reported clustering of co-active synapses that depends on initial connectivity and morphology. Finally, in recurrent neural networks, rich and stable dynamics with high input sensitivity emerge, providing transient activity that resembles recordings from the motor cortex. Our model provides a general framework for codependent plasticity that frames individual synaptic modifications in the context of population-wide changes, allowing us to connect micro-level physiology with behavioural phenomena.

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