TopicPhysics of Life

evolutionary dynamics

Latest

SeminarPhysics of LifeRecording

Growing in flows: from evolutionary dynamics to microbial jets

Severine Atis
University of Chicago
Sep 27, 2021

Biological systems can self-organize in complex structures, able to evolve and adapt to widely varying environmental conditions. Despite the importance of fluid flow for transporting and organizing populations, few laboratory systems exist to systematically investigate the impact of advection on their spatial evolutionary dynamics. In this talk, I will discuss how we can address this problem by studying the morphology and genetic spatial structure of microbial colonies growing on the surface of a viscous substrate. When grown on a liquid, I will show that S. cerevisiae (baker’s yeast) can behave like “active matter” and collectively generate a fluid flow many times larger than the unperturbed colony expansion speed, which in turn produces mechanical stresses and fragmentation of the initial colony. Combining laboratory experiments with numerical modeling, I will demonstrate that the coupling between metabolic activity and hydrodynamic flows can produce positive feedbacks and drive preferential growth phenomena leading to the formation of microbial jets. Our work provides rich opportunities to explore the interplay between hydrodynamics, growth and competition within a versatile system.

SeminarPhysics of Life

Evolutionary Dynamics

Richard Neher, Oskar Hallatschek, Ivana Cvijović
CUNY/ITS, CUNY/Princeton Center for Physics of Biological Function
Oct 9, 2020
SeminarPhysics of LifeRecording

Can we predict the diversity of real populations? Part I: What is linked selection doing to populations?

Workshop, Multiple Speakers: Christelle Fraïsse (IST Austria/CNRS), Derek Setter (U Edinburgh), Kim Gilbert (U Lausanne/U Bern), Ivana Cvijovic (Stanford U)
Emory University
Aug 18, 2020

Natural selection affects not only selected alleles, but also indirectly affects all genes near selected sites on the genome. An increasing body of evidence suggests that this linked selection is an important driver of evolutionary dynamics throughout the genomes of many species, implying that we need to substantially revise our basic understanding of molecular evolution. This session brings together early-career researchers working towards a quantitative understanding of the prevalence and effects of linked selection.

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