At the Institute of Advanced Simulation (IAS-6) at the Research Center Juelich a PhD position is available in the field of Computational Neuroscience to investigate cross-area interactions in the visuo-motor pathway of non-human primates during a visually guided motor task. The data are provided by our experimental partners at INT, CNRS, Marseille. Simultaneous electrophysiological recordings by multiple Utah electrode arrays implanted in V1, V2, V4, 7a, DP and M1 will be studied driven by predictions from theory and network modeling to gain a mechanistic understanding of cross-area interaction signatures. The project is embedded in the interdisciplinary work program of the IAS-6 (www.csn.fz-juelich.de) with experts from network modeling, analytical theory, data analytics, AI and neuromorphic computing.

All animal locomotion is rhythmic,whether it is achieved through undulatory movement of the whole body or the coordination of articulated limbs. Neurobiologists have long studied locomotor circuits that produce rhythmic activity with non-rhythmic input, also called central pattern generators (CPGs). However, the cellular and microcircuit implementation of a walking CPG has not been described for any limbed animal. New comprehensive connectomes of the fruit fly ventral nerve cord (VNC) provide an opportunity to study rhythmogenic walking circuits at a synaptic scale.We use a data-driven network modeling approach to identify and characterize a putative walking CPG in the Drosophila leg motor system.

Biological brains possess an exceptional ability to infer relevant behavioral responses to a wide range of stimuli from only a few examples. This capacity to generalize beyond the training set has been proven particularly challenging to realize in artificial systems. How neural processes enable this capacity to extrapolate to novel stimuli is a fundamental open question. A prominent but underexplored hypothesis suggests that generalization is facilitated by a low-dimensional organization of collective neural activity, yet evidence for the underlying neural mechanisms remains wanting. Combining network modeling, theory and neural data analysis, we tested this hypothesis in the framework of flexible timing tasks, which rely on the interplay between inputs and recurrent dynamics. We first trained recurrent neural networks on a set of timing tasks while minimizing the dimensionality of neural activity by imposing low-rank constraints on the connectivity, and compared the performance and generalization capabilities with networks trained without any constraint. We then examined the trained networks, characterized the dynamical mechanisms underlying the computations, and verified their predictions in neural recordings. Our key finding is that low-dimensional dynamics strongly increases the ability to extrapolate to inputs outside of the range used in training. Critically, this capacity to generalize relies on controlling the low-dimensional dynamics by a parametric contextual input. We found that this parametric control of extrapolation was based on a mechanism where tonic inputs modulate the dynamics along non-linear manifolds in activity space while preserving their geometry. Comparisons with neural recordings in the dorsomedial frontal cortex of macaque monkeys performing flexible timing tasks confirmed the geometric and dynamical signatures of this mechanism. Altogether, our results tie together a number of previous experimental findings and suggest that the low-dimensional organization of neural dynamics plays a central role in generalizable behaviors.

In a famous philosophical paradox, Buridan's ass perishes because he is equally hungry and thirsty, and cannot make up his mind whether to first drink or eat. We are faced daily with the need to pick between alternatives that are equally attractive (or not) to us. What are the processes that allow us to avoid paralysis and to rapidly select between such equal options when there are no preferences or rational reasons to rely on? One solution that was offered is that although on a higher cognitive level there is symmetry between the alternatives, on a neuronal level the symmetry does not maintain. What is the nature of this asymmetry of the neuronal level? In this talk I will present experiments addressing this important phenomenon using measures of human behavior, EEG, EMG and large scale neural network modeling, and discuss mechanisms involved in the process of intention formation and execution, in the face of alternatives to choose from. Specifically, I will show results revealing the temporal dynamics of rapid intention formation and, moreover, ‘change of intention’ in a free choice picking scenario, in which the alternatives are on a par for the participant. The results suggest that even in arbitrary choices, endogenous or exogenous biases that are present in the neural system for selecting one or another option may be implicitly overruled; thus creating an implicit and non-conscious ‘change of mind’. Finally, the question is raised: in what way do such rapid implicit ‘changes of mind’ help retain one’s self-control and free-will behavior?

During periods of persistent and inescapable stress, animals can switch from active to passive coping strategies to manage effort-expenditure. Such normally adaptive behavioural state transitions can become maladaptive in disorders such as depression. We developed a new class of multi-region recurrent neural network (RNN) models to infer brain-wide interactions driving such maladaptive behaviour. The models were trained to match experimental data across two levels simultaneously: brain-wide neural dynamics from 10-40,000 neurons and the realtime behaviour of the fish. Analysis of the trained RNN models revealed a specific change in inter-area connectivity between the habenula (Hb) and raphe nucleus during the transition into passivity. We then characterized the multi-region neural dynamics underlying this transition. Using the interaction weights derived from the RNN models, we calculated the input currents from different brain regions to each Hb neuron. We then computed neural manifolds spanning these input currents across all Hb neurons to define subspaces within the Hb activity that captured communication with each other brain region independently. At the onset of stress, there was an immediate response within the Hb/raphe subspace alone. However, RNN models identified no early or fast-timescale change in the strengths of interactions between these regions. As the animal lapsed into passivity, the responses within the Hb/raphe subspace decreased, accompanied by a concomitant change in the interactions between the raphe and Hb inferred from the RNN weights. This innovative combination of network modeling and neural dynamics analysis points to dual mechanisms with distinct timescales driving the behavioural state transition: early response to stress is mediated by reshaping the neural dynamics within a preserved network architecture, while long-term state changes correspond to altered connectivity between neural ensembles in distinct brain regions.