Place Cells
place cells
Are place cells just memory cells? Probably yes
Neurons in the rodent hippocampus appear to encode the position of the animal in physical space during movement. Individual ``place cells'' fire in restricted sub-regions of an environment, a feature often taken as evidence that the hippocampus encodes a map of space that subserves navigation. But these same neurons exhibit complex responses to many other variables that defy explanation by position alone, and the hippocampus is known to be more broadly critical for memory formation. Here we elaborate and test a theory of hippocampal coding which produces place cells as a general consequence of efficient memory coding. We constructed neural networks that actively exploit the correlations between memories in order to learn compressed representations of experience. Place cells readily emerged in the trained model, due to the correlations in sensory input between experiences at nearby locations. Notably, these properties were highly sensitive to the compressibility of the sensory environment, with place field size and population coding level in dynamic opposition to optimally encode the correlations between experiences. The effects of learning were also strongly biphasic: nearby locations are represented more similarly following training, while locations with intermediate similarity become increasingly decorrelated, both distance-dependent effects that scaled with the compressibility of the input features. Using virtual reality and 2-photon functional calcium imaging in head-fixed mice, we recorded the simultaneous activity of thousands of hippocampal neurons during virtual exploration to test these predictions. Varying the compressibility of sensory information in the environment produced systematic changes in place cell properties that reflected the changing input statistics, consistent with the theory. We similarly identified representational plasticity during learning, which produced a distance-dependent exchange between compression and pattern separation. These results motivate a more domain-general interpretation of hippocampal computation, one that is naturally compatible with earlier theories on the circuit's importance for episodic memory formation. Work done in collaboration with James Priestley, Lorenzo Posani, Marcus Benna, Attila Losonczy.
Extrinsic control and intrinsic computation in the hippocampal CA1 network
A key issue in understanding circuit operations is the extent to which neuronal spiking reflects local computation or responses to upstream inputs. Several studies have lesioned or silenced inputs to area CA1 of the hippocampus - either area CA3 or the entorhinal cortex and examined the effect on CA1 pyramidal cells. However, the types of the reported physiological impairments vary widely, primarily because simultaneous manipulations of these redundant inputs have never been performed. In this study, I combined optogenetic silencing of unilateral and bilateral mEC, of the local CA1 region, and performed bilateral pharmacogenetic silencing of CA3. I combined this with high spatial resolution extracellular recordings along the CA1-dentate axis. Silencing the medial entorhinal largely abolished extracellular theta and gamma currents in CA1, without affecting firing rates. In contrast, CA3 and local CA1 silencing strongly decreased firing of CA1 neurons without affecting theta currents. Each perturbation reconfigured the CA1 spatial map. Yet, the ability of the CA1 circuit to support place field activity persisted, maintaining the same fraction of spatially tuned place fields. In contrast to these results, unilateral mEC manipulations that were ineffective in impacting place cells during awake behavior were found to alter sharp-wave ripple sequences activated during sleep. Thus, intrinsic excitatory-inhibitory circuits within CA1 can generate neuronal assemblies in the absence of external inputs, although external synaptic inputs are critical to reconfigure (remap) neuronal assemblies in a brain-state dependent manner.
Extrinsic control and autonomous computation in the hippocampal CA1 circuit
In understanding circuit operations, a key issue is the extent to which neuronal spiking reflects local computation or responses to upstream inputs. Because pyramidal cells in CA1 do not have local recurrent projections, it is currently assumed that firing in CA1 is inherited from its inputs – thus, entorhinal inputs provide communication with the rest of the neocortex and the outside world, whereas CA3 inputs provide internal and past memory representations. Several studies have attempted to prove this hypothesis, by lesioning or silencing either area CA3 or the entorhinal cortex and examining the effect of firing on CA1 pyramidal cells. Despite the intense and careful work in this research area, the magnitudes and types of the reported physiological impairments vary widely across experiments. At least part of the existing variability and conflicts is due to the different behavioral paradigms, designs and evaluation methods used by different investigators. Simultaneous manipulations in the same animal or even separate manipulations of the different inputs to the hippocampal circuits in the same experiment are rare. To address these issues, I used optogenetic silencing of unilateral and bilateral mEC, of the local CA1 region, and performed bilateral pharmacogenetic silencing of the entire CA3 region. I combined this with high spatial resolution recording of local field potentials (LFP) in the CA1-dentate axis and simultaneously collected firing pattern data from thousands of single neurons. Each experimental animal had up to two of these manipulations being performed simultaneously. Silencing the medial entorhinal (mEC) largely abolished extracellular theta and gamma currents in CA1, without affecting firing rates. In contrast, CA3 and local CA1 silencing strongly decreased firing of CA1 neurons without affecting theta currents. Each perturbation reconfigured the CA1 spatial map. Yet, the ability of the CA1 circuit to support place field activity persisted, maintaining the same fraction of spatially tuned place fields, and reliable assembly expression as in the intact mouse. Thus, the CA1 network can maintain autonomous computation to support coordinated place cell assemblies without reliance on its inputs, yet these inputs can effectively reconfigure and assist in maintaining stability of the CA1 map.
NaV Long-term Inactivation Regulates Adaptation in Place Cells and Depolarization Block in Dopamine Neurons
In behaving rodents, CA1 pyramidal neurons receive spatially-tuned depolarizing synaptic input while traversing a specific location within an environment called its place. Midbrain dopamine neurons participate in reinforcement learning, and bursts of action potentials riding a depolarizing wave of synaptic input signal rewards and reward expectation. Interestingly, slice electrophysiology in vitro shows that both types of cells exhibit a pronounced reduction in firing rate (adaptation) and even cessation of firing during sustained depolarization. We included a five state Markov model of NaV1.6 (for CA1) and NaV1.2 (for dopamine neurons) respectively, in computational models of these two types of neurons. Our simulations suggest that long-term inactivation of this channel is responsible for the adaptation in CA1 pyramidal neurons, in response to triangular depolarizing current ramps. We also show that the differential contribution of slow inactivation in two subpopulations of midbrain dopamine neurons can account for their different dynamic ranges, as assessed by their responses to similar depolarizing ramps. These results suggest long-term inactivation of the sodium channel is a general mechanism for adaptation.
Targeted Activation of Hippocampal Place Cells Drives Memory-Guided Spatial Behaviour
The hippocampus is crucial for spatial navigation and episodic memory formation. Hippocampal place cells exhibit spatially selective activity within an environment and have been proposed to form the neural basis of a cognitive map of space that supports these mnemonic functions. However, the direct influence of place cell activity on spatial navigation behaviour has not yet been demonstrated. Using an ‘all-optical’ combination of simultaneous two-photon calcium imaging and two-photon holographically targeted optogenetics, we identified and selectively activated place cells that encoded behaviourally relevant locations in a virtual reality environment. Targeted stimulation of a small number of place cells was sufficient to bias the behaviour of animals during a spatial memory task, providing causal evidence that hippocampal place cells actively support spatial navigation and memory. Time permitting, I will also describe new experiments aimed at understanding the fundamental encoding mechanism that supports episodic memory, focussing on the role of hippocampal sequences across multiple timescales and behaviours.
Neural representations of space in the hippocampus of a food-caching bird
Spatial memory in vertebrates requires brain regions homologous to the mammalian hippocampus. Between vertebrate clades, however, these regions are anatomically distinct and appear to produce different spatial patterns of neural activity. We asked whether hippocampal activity is fundamentally different even between distant vertebrates that share a strong dependence on spatial memory. We studied tufted titmice – food-caching birds capable of remembering many concealed food locations. We found mammalian-like neural activity in the titmouse hippocampus, including sharp-wave ripples and anatomically organized place cells. In a non-food-caching bird species, spatial firing was less informative and was exhibited by fewer neurons. These findings suggest that hippocampal circuit mechanisms are similar between birds and mammals, but that the resulting patterns of activity may vary quantitatively with species-specific ethological needs.
Dynamic maps of a dynamic world
Extensive research has revealed that the hippocampus and entorhinal cortex maintain a rich representation of space through the coordinated activity of place cells, grid cells, and other spatial cell types. Frequently described as a ‘cognitive map’ or a ‘hippocampal map’, these maps are thought to support episodic memory through their instantiation and retrieval. Though often a useful and intuitive metaphor, a map typically evokes a static representation of the external world. However, the world itself, and our experience of it, are intrinsically dynamic. In order to make the most of their maps, a navigator must be able to adapt to, incorporate, and overcome these dynamics. Here I describe three projects where we address how hippocampal and entorhinal representations do just that. In the first project, I describe how boundaries dynamically anchor entorhinal grid cells and human spatial memory alike when the shape of a familiar environment is changed. In the second project, I describe how the hippocampus maintains a representation of the recent past even in the absence of disambiguating sensory and explicit task demands, a representation which causally depends on intrinsic hippocampal circuitry. In the third project, I describe how the hippocampus preserves a stable representation of context despite ongoing representational changes across a timescale of weeks. Together, these projects highlight the dynamic and adaptive nature of our hippocampal and entorhinal representations, and set the stage for future work building on these techniques and paradigms.
On places and borders in the brain
While various forms of cells have been found in relation to the hippocampus cognitive map and navigation system, how these cells are formed and what is read from them is still a mystery. In the current lecture I will talk about several projects which tackle these issues. First, I will show how the formation of border cells in the coginitive map is related to a coordinate transformation, second I will discuss the interaction between the reward system (VTA) and the hippocampus. Finally I will describe a project using place cells as a proxy for associative memory for assessing deficits in Alzheimer’s disease.
Thinking the Right Thoughts
In many learning and decision scenarios, especially sequential settings like mazes or games, it is easy to state an objective function but difficult to compute it, for instance because this can require enumerating many possible future trajectories. This, in turn, motivates a variety of more tractable approximations which then raise resource-rationality questions about whether and when an efficient agent should invest time or resources in computing decision variables more accurately. Previous work has used a simple all-or-nothing version of this reasoning as a framework to explain many phenomena of automaticity, habits, and compulsion in humans and animals. Here, I present a more finegrained theoretical analysis of deliberation, which attempts to address not just whether to deliberate vs. act, but which of many possible actions and trajectories to consider. Empirically, I first motivate and compare this account to nonlocal representations of spatial trajectories in the rodent place cell system, which are thought to be involved in planning. I also consider its implications, in humans, for variation over time and situations in subjective feelings of mental effort, boredom, and cognitive fatigue. Finally, I present results from a new study using magnetoencephalography in humans to measure subjective consideration of possible trajectories during a sequential learning task, and study its relationship to rational prioritization and to choice behavior.
The Cognitive Map Theory – 40 Years On
John O’Keefe is a Professor of Cognitive Neuroscience at UCL and he received the Nobel Prize in Physiology or Medicine in 2014 for his “discoveries of cells that constitute a positioning system in the brain". His revolutionary research on hippocampal place cells provided deeper insight into the neural processes underlying the sense of space. His lab in Sainsbury Wellcome Centre applies a wide range of methods to facilitate our understanding of the role of the entorhinal cortex and hippocampus in spatial memory and the neural mechanisms underlying short-term memories in the amygdala.
The Role of Hippocampal Replay in Memory Consolidation
The hippocampus lies at the centre of a network of brain regions thought to support spatial and episodic memory. Place cells - the principal cell of the hippocampus, represent information about an animal’s spatial location. Yet, during rest and awake quiescence place cells spontaneously recapitulate past trajectories (‘replay’). Replay has been hypothesised to support systems consolidation – the stabilisation of new memories via maturation of complementary cortical memory traces. Indeed, in recent work we found place and grid cells, from the deep medial entorhinal cortex (dMEC, the principal cortical output region of the hippocampus), replayed coherently during rest periods. Importantly, dMEC grid cells lagged place cells by ~11ms; suggesting the coordination may reflect consolidation. Moreover, preliminary data shows that the dMEC-hippocampal coordination strengthens as an animal becomes familiar with a task and that it may be led by directionally modulated cells. Finally, on-going work, in my recently established lab, shows replay may represent the mechanism underlying the maturation of episodic/spatial memory in pre-weanling pups. Together, these results indicate replay may play a central role in ensuring the permanency of memories.
To & From: Hippobellum & LINCs
The hippocampus is a well-studied structure, important for spatial navigation, learning, and memory. The hippocampus, however, still contains secrets and does not work in a vacuum. LINCs are a novel form of long-range inhibitory neuron in the hippocampus, which may be important for coordinating activity between the hippocampus and downstream structures. The cerebellum, while classically viewed as a motor structure, is being increasingly recognized for its impact on cognitive domains. Recent work has demonstrated that the cerebellum can influence the hippocampus, including place cells.
Revealing the neural basis of human memory with direct recordings of place and grid cells and traveling waves
The ability to remember spatial environments is critical for everyday life. In this talk, I will discuss my lab’s findings on how the human brain supports spatial memory and navigation based on our experiments with direct brain recordings from neurosurgical patients performing virtual-reality spatial memory tasks. I will show that humans have a network of neurons that represent where we are located and trying to go. This network includes some cell types that are similar to those seen in animals, such as place and grid cells, as well as others that have not been seen before in animals, such as anchor and spatial-target cells. I also will explore the role of network oscillations in human memory, where humans again show several distinctive patterns compared to animals. Whereas rodents generally show a hippocampal oscillation at ~8Hz, humans have two separate hippocampal oscillations, at low and high frequencies, which support memory and navigation, respectively. Finally, I will show that neural oscillations in humans are traveling waves, propagating across the cortex, to coordinate the timing of neuronal activity across regions, which is another property not seen in animals. A theme from this work is that in terms of navigation and memory the human brain has novel characteristics compared with animals, which helps explain our rich behavioural abilities and has implications for treating disease and neurological disorders.
Equal contribution of place cells and non-place cells to the position decoding from one-photon imaging calcium transients
Bernstein Conference 2024
Moving bar of light evokes vectorial spatial selectivity in hippocampal place cells
COSYNE 2022
Moving bar of light evokes vectorial spatial selectivity in hippocampal place cells
COSYNE 2022
Single cell measures of tuning to imagined position during replay show preserved spatial tuning but quenched neural variability in place cells.
COSYNE 2022
Single cell measures of tuning to imagined position during replay show preserved spatial tuning but quenched neural variability in place cells.
COSYNE 2022
Place Cells are Clustered by Field Location in CA1 Hippocampus
COSYNE 2023
Contribution of dendritic Ca- and Na-spikes to burst firing in hippocampal place cells
COSYNE 2025
Hippocampal place cells can map space using distal auditory cues
FENS Forum 2024