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research

Discover seminars, jobs, and research tagged with research across World Wide.
102 curated items60 Seminars25 Positions15 ePosters2 Conferences
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102 items · research
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SeminarNeuroscience

Consciousness at the edge of chaos

Martin Monti
University of California Los Angeles
Dec 11, 2025

Over the last 20 years, neuroimaging and electrophysiology techniques have become central to understanding the mechanisms that accompany loss and recovery of consciousness. Much of this research is performed in the context of healthy individuals with neurotypical brain dynamics. Yet, a true understanding of how consciousness emerges from the joint action of neurons has to account for how severely pathological brains, often showing phenotypes typical of unconsciousness, can nonetheless generate a subjective viewpoint. In this presentation, I will start from the context of Disorders of Consciousness and will discuss recent work aimed at finding generalizable signatures of consciousness that are reliable across a spectrum of brain electrophysiological phenotypes focusing in particular on the notion of edge-of-chaos criticality.

SeminarNeuroscience

Computational Mechanisms of Predictive Processing in Brains and Machines

Dr. Antonino Greco
Hertie Institute for Clinical Brain Research, Germany
Dec 9, 2025

Predictive processing offers a unifying view of neural computation, proposing that brains continuously anticipate sensory input and update internal models based on prediction errors. In this talk, I will present converging evidence for the computational mechanisms underlying this framework across human neuroscience and deep neural networks. I will begin with recent work showing that large-scale distributed prediction-error encoding in the human brain directly predicts how sensory representations reorganize through predictive learning. I will then turn to PredNet, a popular predictive coding inspired deep network that has been widely used to model real-world biological vision systems. Using dynamic stimuli generated with our Spatiotemporal Style Transfer algorithm, we demonstrate that PredNet relies primarily on low-level spatiotemporal structure and remains insensitive to high-level content, revealing limits in its generalization capacity. Finally, I will discuss new recurrent vision models that integrate top-down feedback connections with intrinsic neural variability, uncovering a dual mechanism for robust sensory coding in which neural variability decorrelates unit responses, while top-down feedback stabilizes network dynamics. Together, these results outline how prediction error signaling and top-down feedback pathways shape adaptive sensory processing in biological and artificial systems.

PositionArtificial Intelligence

Prof. Thilo Stadelmann

ZHAW School of Engineering
Winterthur, Switzerland
Dec 5, 2025

Head of a new research group and member of the Centre Board for a Senior Lecturer Autonomous Learning Systems and Reinforcement Learning (incl. responsibility in research & leadership) 50 - 100 %.

PositionComputer Science

Prof. Dr.-Ing. Marcus Magnor

Technische Universität Braunschweig
Technische Universität Braunschweig, Germany
Dec 5, 2025

The job is a W3 Full Professorship for Artificial Intelligence in interactive Systems at Technische Universität Braunschweig. The role involves expanding the research area of data-driven methods for interactive and intelligent systems at the TU Braunschweig and strengthening the focal points 'Data Science' and 'Reliability' of the Department of Computer Science. The position holder is expected to have a strong background in Computer Science with a focus on Artificial Intelligence/​Machine Learning, specifically in the areas of Dependable AI and Explainable AI. The role also involves teaching, topic-related courses in the areas of Artificial Intelligence and Machine Learning to complement the Bachelor's and Master's degree programs of the Department of Computer Science.

PositionComputer Science

Justus Piater, Antonio Rodríguez-Sánchez, Samuele Tosatto

University of Innsbruck, Intelligent and Interactive Systems group
University of Innsbruck, Austria
Dec 5, 2025

This is a university doctoral position that involves minor teaching duties. The precise research topics are negotiable within the scope of active research at IIS, including machine learning and growing levels of AI for computer vision and robotics. Of particular interest are topics in representation learning and causality for out-of-distribution situations.

Position

N/A

Saarland University, the Max Planck Institute for Informatics, the Max Planck Institute for Software Systems, the CISPA Helmholtz Center for Information Security, and the German Research Center for Artificial Intelligence (DFKI)
Saarbrücken, Germany
Dec 5, 2025

The Research Training Group 2853 “Neuroexplicit Models of Language, Vision, and Action” is looking for 3 PhD students and 1 postdoc. Neuroexplicit models combine neural and human-interpretable (“explicit”) models in order to overcome the limitations that each model class has separately. They include neurosymbolic models, which combine neural and symbolic models, but also e.g. combinations of neural and physics-based models. In the RTG, we will improve the state of the art in natural language processing (“Language”), computer vision (“Vision”), and planning and reinforcement learning (“Action”) through the use of neuroexplicit models and investigate the cross-cutting design principles of effective neuroexplicit models (“Foundations”).

Position

N/A

Technical University of Darmstadt, Hessian Center for Artificial Intelligence, Centre for Cognitive Science
Darmstadt
Dec 5, 2025

The position holder will be a member of the Hessian Center for Artificial Intelligence - hessian.AI and provides research at the Center and will also be a member of the Centre for Cognitive Science. The scientific focus of the position is on the computational and algorithmic modeling of behavioral data to understand the human mind. Exemplary research topics include computational level models of perception, cognition, decision making, action, and learning as well as extended behavior and social interactions in humans, algorithmic models that are able to simulate, predict, and explain human behavior, model-driven behavioral research on human cognition. The professorship is expected to strengthen the Hessian Center for Artificial Intelligence and TU Darmstadt’s Human Science department’s research focus on Cognitive Science. Depending on the candidate’s profile there is the opportunity to participate in joint research projects currently running at TU Darmstadt. This in particular includes the state funded cluster projects “The Adaptive Mind (TAM)” and “The Third Wave of Artificial Intelligence (3AI)”. In addition to excellent scientific credentials, we seek a strong commitment to teaching in the department’s Bachelor and Masters programs in Cognitive Science. Experience in attracting third-party funding as well as participation in academic governance is expected.

Position

Prof. (Dr.) Swagatam Das

Institute for Advancing Intelligence (IAI), TCG Centre for Research and Education in Science and Technology (CREST)
Kolkata, India
Dec 5, 2025

We are seeking highly qualified and motivated individuals for the positions of Assistant and Associate Professors in Artificial Intelligence (AI) and Machine Learning (ML). The successful candidate will join our esteemed faculty in the Institute for Advancing Intelligence (IAI), TCG Centre for Research and Education in Science and Technology (CREST), Kolkata, India, and contribute to our commitment to excellence in research, teaching, and academic services. TCG CREST has set up the campus in Sector V, Salt Lake City, Kolkata, India. State-of-the-art laboratories and research facilities for the individual Institutes, spacious classrooms and technology interventions for executing both off-line and on-line academic classes and programs, conference rooms, and other infrastructures provide the students and the faculty an ideal environment for creative exchanges and high-end research collaborations.

Position

Eugenio Piasini

International School for Advanced Studies (SISSA)
Trieste, Italy
Dec 5, 2025

SISSA is an elite postgraduate research institution for Maths, Physics and Neuroscience, located in Trieste, Italy. The Cognitive Neuroscience Department hosts 7 research labs that study the neuronal bases of time and magnitude processing, visual perception, motivation and intelligence, language and reading, tactile perception and learning, and neural computation. The Department is highly interdisciplinary; our approaches include behavioural, psychophysics, and neurophysiological experiments with humans and animals, as well as computational, statistical and mathematical models.

Position

Prof. Dr. Dominik Endres

Department of Psychology, Philipps University of Marburg
Philipps University of Marburg
Dec 5, 2025

We are looking for a scientist who will strengthen the research focus of the Department of Psychology by setting up their own research group and who will actively participate in collaborations and research initiatives at the Department of Psychology and the Philipps University. The professorship will develop computational methods for modeling and evaluating human behavior, efficient information processing, adaptation to the environment and interaction with the environment. The professorship builds a bridge to computer science and thus supports the AI-initiative of the Philipps University of Marburg.

PositionNeuroscience

Sahar Moghimi

Groupe de Recherches sur l’Analyse Multimodale de la Fonction Cérébrale
Amiens, France
Dec 5, 2025

The post-doc/PhD will be fully dedicated to extracting the EEG correlates of rhythm processing in the course of development, aiming to extract the neural response to different rhythmic characteristics, and to evaluate the impact of musical interventions on neurodevelopment. The project aims to evaluate the development of rhythm perception starting from the third trimester of gestation into infancy, and the impact of early musical interventions in the NICU on preterm infants’ development. In this cross-sectional and longitudinal study, we will evaluate the development of auditory rhythm processing capacities with EEG, and behavioral protocols.

Position

Georgios N. Yannakakis

Institute of Digital Games, University of Malta
Institute of Digital Games, University of Malta, 20 Triq L-Esperanto
Dec 5, 2025

Join our AI research group at the Institute of Digital Games - University of Malta. We have a number of research posts (research associates, PhD students and Postdoctoral fellows) open currently. Be part of a research team that builds the next generation AI algorithms that play, feel and design games. We are looking for excellent candidates with a good grasp of as many of the following areas as possible: deep/shallow learning, affect annotation and modelling, human-computer interaction, computer vision, behaviour cloning, procedural content generation, generative systems.

Position

Constantine Dovrolis

The Cyprus Institute
Cyprus
Dec 5, 2025

The Cyprus Institute invites applications for a Post-Doctoral Fellow to pursue research in Machine Learning. The successful candidate will be actively engaged in cutting-edge research in terms of core problems in ML and AI such as developing efficient and interpretable deep nets, continual learning, neuro-inspired ML, self-supervised learning, and other cutting-edge topics. The candidate should have deep understanding of machine learning fundamentals (e.g., linear algebra, probability theory, optimization) as well as broad knowledge of the state-of-the-art in AI and machine and learning. Additionally, the candidate should have extensive experience with ML programming frameworks (e.g., PyTorch). The candidate will be working primarily with two PIs: Prof. Constantine Dovrolis and Prof. Mihalis Nicolaou. The appointment is for a period of 2 years, with the option of renewal subject to performance and the availability of funds.

PositionComputer Science

Dr. D.M. Lyons

Fordham University
New York City
Dec 5, 2025

Fordham University (New York City) has developed a unique Ph.D. program in Computer Science, tuned to the latest demands and opportunities of the field. Upon completion of the Ph.D. in Computer Science program, students will be able to demonstrate the fundamental, analytical, and computational knowledge and methodology needed to conduct original research and practical experiments in the foundations and theory of computer science, in software and systems, and in informatics and data analytics. They will also be able to apply computing and informatics methods and techniques to understand, analyze, and solve a variety of significant, real-world problems and issues in the cyber, physical, and social domains. Furthermore, they will be able to conduct original, high-quality, ethically informed, scientific research and publish in respected, peer-reviewed, journals and conferences. Lastly, they will be able to effectively instruct others in a variety of topics in Computer Science at the university level, addressing ethics, justice, diversity, and sustainability. This training and education means that graduates can pursue careers at the university level, but also research and leadership positions in industry and government and within the leading technology companies. A hallmark of the program is early involvement in research, within the first two years of the program. Students will have the opportunity to carry out research in machine learning and AI/robotics, big data analytics and informatics, data and information fusion, information and cyber security, and software engineering and systems.

PositionComputational Neuroscience

Friedemann Zenke

Friedrich Miescher Institute
Basel, Switzerland
Dec 5, 2025

The position involves conducting research in computational neuroscience and bio-inspired machine intelligence, writing research articles and presenting them at international conferences, publishing in neuroscience journals and machine learning venues such as ICML, NeurIPS, ICLR, etc., and interacting and collaborating with experimental neuroscience groups or neuromorphic hardware developers nationally and internationally.

Position

Odelia

University of Miami, Department of Computer Science, Institute for Data Science and Computing (IDSC)
Coral Gables, FL
Dec 5, 2025

The Department of Computer Science at University of Miami is inviting applications for tenure-track or tenure eligible faculty positions at levels of Associate Professor and Professor. The successful candidates must conduct research in Data Science, including areas such as Machine Learning, Deep Learning, Computer Vision, Cognitive Cybersecurity, Blockchain, Real-time Analytics, Streaming Analytics, Cyber-analytics, and Edge Computing, and are expected to develop/maintain an internationally recognized research program. The selected candidate will be expected to teach classes at the undergraduate and graduate levels. The faculty in these positions will be housed primarily in the Department of Computer Science and will have responsibilities in the Institute for Data Science and Computing (IDSC).

Position

Mengmi Zhang

Nanyang Technological University (NTU), Singapore; A*STAR, Singapore
Nanyang Technological University (NTU), Singapore
Dec 5, 2025

Our Deep NeuroCognition Lab in NTU and A*STAR, Singapore is currently recruiting multiple PhD students and postdocs. Research experiences in neuroscience, cognitive science, and AI are preferred. Students and staff members will receive competitive monthly salaries/scholarships and other benefits (e.g. medical insurance, annual leave, sick leave).

Position

N/A

International Max Planck Research School for Intelligent Systems
Tübingen and Stuttgart, Germany
Dec 5, 2025

The Max Planck Institute for Intelligent Systems and the Universities of Stuttgart and Tübingen collaborate to offer an interdisciplinary doctoral program, the International Max Planck Research School for Intelligent Systems (IMPRS-IS). This doctoral program will accept its ninth generation of Ph.D. students in spring of 2024. This school is a key element of Baden-Württemberg’s Cyber Valley initiative to accelerate basic research and commercial development in artificial intelligence and robotics. We seek students who want to earn a doctorate while contributing to world-leading research in areas such as Artificial Intelligence, Biomedical Technology, Computational Cognitive Science, Computer Vision and Graphics, Control Systems and Optimization, Data Science & Visualization, Haptics and Human-Computer Interaction, Machine Learning, Micro- and Nano-Robotics, Natural Language Processing, Neuroscience, Perceptual Inference, Robotics and Human-Robot Interaction, Soft Robotics and Materials. Admitted students can join our program starting in spring of 2025. You will be mentored by our internationally renowned faculty. You will register as a university doctoral student and conduct research. IMPRS-IS offers a wide variety of scientific seminars, workshops, and social activities. All aspects of our program are in English. Your doctoral degree will be conferred when you successfully complete your doctoral project. Our dedicated staff members will assist you throughout your time as a doctoral student.

Position

N/A

University of Edinburgh
University of Edinburgh, Scotland
Dec 5, 2025

Applications are invited for an academic position in machine learning in the School of Informatics at the University of Edinburgh, as part of a continuing expansion in Machine Learning and Artificial Intelligence. The appointment will be full-time and open-ended. The successful candidate will have (or be near to completing) a PhD, an established research agenda and the enthusiasm and ability to undertake original research, and to lead a research group. They will show excellent teaching capability and engagement with academic supervision. We are seeking current and future leaders in the field. We seek candidates with research interests in the development of cutting-edge machine learning methods. Candidates will have a research interests in principled approaches to machine learning, machine learning for novel or critical applications, and/or the development of novel methods of wide applicability and with state-of-the-art capability.

PositionArtificial Intelligence

N/A

KINDI Center for Computing Research, College of Engineering, Qatar University
Qatar University
Dec 5, 2025

The KINDI Center for Computing Research at the College of Engineering in Qatar University is seeking high-caliber candidates for a research faculty position at the level of assistant professor in the area of artificial intelligence (AI). The applicant should possess a Ph.D. degree in Computer Science or Computer Engineering or related fields from an internationally recognized university and should demonstrate an outstanding research record in AI and related subareas (e.g., machine/deep learning (ML/DL), computer vision, robotics, natural language processing, etc.) and fields (e.g., data science, big data analytics, etc.). Candidates with good hands-on experience are preferred. The position is available immediately.

PositionArtificial Intelligence

Prof. Thilo Stadelmann

ZHAW School of Engineering
Winterthur, Switzerland
Dec 5, 2025

Head of a new research group and member of the Centre Board for a Senior Lecturer Autonomous Learning Systems and Reinforcement Learning (incl. responsibility in research & leadership) 50 - 100 %.

SeminarOpen Source

Computational bio-imaging via inverse scattering

Shwetadwip Chowdhury
Assistant Professor, University of Texas at Austin
Nov 24, 2025

Optical imaging is a major research tool in the basic sciences, and is the only imaging modality that routinely enables non-ionized imaging with subcellular spatial resolutions and high imaging speeds. In biological imaging applications, however, optical imaging is limited by tissue scattering to short imaging depths. This prevents large-scale bio-imaging by allowing visualization of only the outer superficial layers of an organism, or specific components isolated from within the organism and prepared in-vitro.

SeminarOpen Source

Introduction to protocols.io: Scientific collaboration through open protocols

Lenny Teytelman
Founder & President of protocols.io
Nov 17, 2025

Research articles and laboratory protocol organization often lack detailed instructions for replicating experiments. protocols.io is an open-access platform where researchers collaboratively create dynamic, interactive, step-by-step protocols that can be executed on mobile devices or the web. Researchers can easily and efficiently share protocols with colleagues, collaborators, the scientific community, or make them public. Real-time communication and interaction keep protocols up to date. Public protocols receive a DOI and enable open communication with authors and researchers to foster efficient experimentation and reproducibility.

SeminarNeuroscience

Biomolecular condensates as drivers of neuroinflammation

Steven Boeynaems
Department of Molecular and Human Genetics, Baylor College of Medicine Duncan Neurological Research Institute, Texas Children's Hospital, USA
Nov 3, 2025
SeminarNeuroscience

NF1 exon 51 alternative splicing: functional implications in Central Nervous System (CNS) Cells

Charoula Peta
Biomedical research Foundation of the Academy of Athens
Oct 21, 2025
SeminarOpen Source

Introduction to protocols.io: Scientific collaboration through open protocols

Lenny Teytelman
Founder & President of protocols.io
Sep 24, 2025

Research articles and laboratory protocol organization often lack detailed instructions for replicating experiments. protocols.io is an open-access platform where researchers collaboratively create dynamic, interactive, step-by-step protocols that can be executed on mobile devices or the web. Researchers can easily and efficiently share protocols with colleagues, collaborators, the scientific community, or make them public. Real-time communication and interaction keep protocols up to date. Public protocols receive a DOI and enable open communication with authors and researchers to foster efficient experimentation and reproducibility.

SeminarOpen Source

The SIMple microscope: Development of a fibre-based platform for accessible SIM imaging in unconventional environments

Rebecca McClelland
PhD student at the University of Cambridge, United Kingdom.
Aug 25, 2025

Advancements in imaging speed, depth and resolution have made structured illumination microscopy (SIM) an increasingly powerful optical sectioning (OS) and super-resolution (SR) technique, but these developments remain inaccessible to many life science researchers due to the cost, optical complexity and delicacy of these instruments. We address these limitations by redesigning the optical path using in-line fibre components that are compact, lightweight and easily assembled in a “Plug & Play” modality, without compromising imaging performance. They can be integrated into an existing widefield microscope with a minimum of optical components and alignment, making OS-SIM more accessible to researchers with less optics experience. We also demonstrate a complete SR-SIM imaging system with dimensions 300 mm × 300 mm × 450 mm. We propose to enable accessible SIM imaging by utilising its compact, lightweight and robust design to transport it where it is needed, and image in “unconventional” environments where factors such as temperature and biosafety considerations currently limit imaging experiments.

SeminarNeuroscience

OpenNeuro FitLins GLM: An Accessible, Semi-Automated Pipeline for OpenNeuro Task fMRI Analysis

Michael Demidenko
Stanford University
Jul 31, 2025

In this talk, I will discuss the OpenNeuro Fitlins GLM package and provide an illustration of the analytic workflow. OpenNeuro FitLins GLM is a semi-automated pipeline that reduces barriers to analyzing task-based fMRI data from OpenNeuro's 600+ task datasets. Created for psychology, psychiatry and cognitive neuroscience researchers without extensive computational expertise, this tool automates what is largely a manual process and compilation of in-house scripts for data retrieval, validation, quality control, statistical modeling and reporting that, in some cases, may require weeks of effort. The workflow abides by open-science practices, enhancing reproducibility and incorporates community feedback for model improvement. The pipeline integrates BIDS-compliant datasets and fMRIPrep preprocessed derivatives, and dynamically creates BIDS Statistical Model specifications (with Fitlins) to perform common mass univariate [GLM] analyses. To enhance and standardize reporting, it generates comprehensive reports which includes design matrices, statistical maps and COBIDAS-aligned reporting that is fully reproducible from the model specifications and derivatives. OpenNeuro Fitlins GLM has been tested on over 30 datasets spanning 50+ unique fMRI tasks (e.g., working memory, social processing, emotion regulation, decision-making, motor paradigms), reducing analysis times from weeks to hours when using high-performance computers, thereby enabling researchers to conduct robust single-study, meta- and mega-analyses of task fMRI data with significantly improved accessibility, standardized reporting and reproducibility.

SeminarPsychology

A personal journey on understanding intelligence

Li Yang Ku
Google DeepMind
Jul 15, 2025

The focus of this talk is not about my research in AI or Robotics but my own journey on trying to do research and understand intelligence in a rapidly evolving research landscape. I will trace my path from conducting early-stage research during graduate school, to working on practical solutions within a startup environment, and finally to my current role where I participate in more structured research at a major tech company. Through these varied experiences, I will provide different perspectives on research and talk about how my core beliefs on intelligence have changed and sometimes even been compromised. There are no lessons to be learned from my stories, but hopefully they will be entertaining.

SeminarNeuroscience

“Brain theory, what is it or what should it be?”

Prof. Guenther Palm
University of Ulm
Jun 26, 2025

n the neurosciences the need for some 'overarching' theory is sometimes expressed, but it is not always obvious what is meant by this. One can perhaps agree that in modern science observation and experimentation is normally complemented by 'theory', i.e. the development of theoretical concepts that help guiding and evaluating experiments and measurements. A deeper discussion of 'brain theory' will require the clarification of some further distictions, in particular: theory vs. model and brain research (and its theory) vs. neuroscience. Other questions are: Does a theory require mathematics? Or even differential equations? Today it is often taken for granted that the whole universe including everything in it, for example humans, animals, and plants, can be adequately treated by physics and therefore theoretical physics is the overarching theory. Even if this is the case, it has turned out that in some particular parts of physics (the historical example is thermodynamics) it may be useful to simplify the theory by introducing additional theoretical concepts that can in principle be 'reduced' to more complex descriptions on the 'microscopic' level of basic physical particals and forces. In this sense, brain theory may be regarded as part of theoretical neuroscience, which is inside biophysics and therefore inside physics, or theoretical physics. Still, in neuroscience and brain research, additional concepts are typically used to describe results and help guiding experimentation that are 'outside' physics, beginning with neurons and synapses, names of brain parts and areas, up to concepts like 'learning', 'motivation', 'attention'. Certainly, we do not yet have one theory that includes all these concepts. So 'brain theory' is still in a 'pre-newtonian' state. However, it may still be useful to understand in general the relations between a larger theory and its 'parts', or between microscopic and macroscopic theories, or between theories at different 'levels' of description. This is what I plan to do.

SeminarNeuroscience

Functional Imaging of the Human Brain: A Window into the Organization of the Human Mind

Nancy Kanwisher
Massachusetts Institute of Technology & McGovern Institute for Brain Research
Jun 25, 2025
SeminarNeuroscience

Gene regulation networks in nervous system cancers: identification of novel drug targets

Politis Panagiotis
Center for Basic Research, Biomedical Research Foundation of the Academy of Athens
Jun 19, 2025
SeminarPsychology

An Ecological and Objective Neural Marker of Implicit Unfamiliar Identity Recognition

Tram Nguyen
University of Malta
Jun 10, 2025

We developed a novel paradigm measuring implicit identity recognition using Fast Periodic Visual Stimulation (FPVS) with EEG among 16 students and 12 police officers with normal face processing abilities. Participants' neural responses to a 1-Hz tagged oddball identity embedded within a 6-Hz image stream revealed implicit recognition with high-quality mugshots but not CCTV-like images, suggesting optimal resolution requirements. Our findings extend previous research by demonstrating that even unfamiliar identities can elicit robust neural recognition signatures through brief, repeated passive exposure. This approach offers potential for objective validation of face processing abilities in forensic applications, including assessment of facial examiners, Super-Recognisers, and eyewitnesses, potentially overcoming limitations of traditional behavioral assessment methods.

SeminarNeuroscience

Astrocytes release glutamate by regulated exocytosis in health and disease

Vladimir Parpura
Distinguished Professor Zhejiang Chinese Medical University and Director of the International Translational Neuroscience Research Institute, Hangzhou, P.R. China
Jun 4, 2025

Astrocytes release glutamate by regulated exocytosis in health and disease Vladimir Parpura, International Translational Neuroscience Research Institute, Zhejiang Chinese Medical University, Hangzhou, P.R. China Parpura will present you with the evidence that astrocytes, a subtype of glial cells in the brain, can exocytotically release the neurotransmitter glutamate and how this release is regulated. Spatiotemporal characteristic of vesicular fusion that underlie glutamate release in astrocytes will be discussed. He will also present data on a translational project in which this release pathway can be targeted for the treatment of glioblastoma, the deadliest brain cancer.

SeminarOpen Source

“A Focus on 3D Printed Lenses: Rapid prototyping, low-cost microscopy and enhanced imaging for the life sciences”

Liam Rooney
University of Glasgow
May 21, 2025

High-quality glass lenses are commonplace in the design of optical instrumentation used across the biosciences. However, research-grade glass lenses are often costly, delicate and, depending on the prescription, can involve intricate and lengthy manufacturing - even more so in bioimaging applications. This seminar will outline 3D printing as a viable low-cost alternative for the manufacture of high-performance optical elements, where I will also discuss the creation of the world’s first fully 3D printed microscope and other implementations of 3D printed lenses. Our 3D printed lenses were generated using consumer-grade 3D printers and pose a 225x materials cost-saving compared to glass optics. Moreover, they can be produced in any lab or home environment and offer great potential for education and outreach. Following performance validation, our 3D printed optics were implemented in the production of a fully 3D printed microscope and demonstrated in histological imaging applications. We also applied low-cost fabrication methods to exotic lens geometries to enhance resolution and contrast across spatial scales and reveal new biological structures. Across these applications, our findings showed that 3D printed lenses are a viable substitute for commercial glass lenses, with the advantage of being relatively low-cost, accessible, and suitable for use in optical instruments. Combining 3D printed lenses with open-source 3D printed microscope chassis designs opens the doors for low-cost applications for rapid prototyping, low-resource field diagnostics, and the creation of cheap educational tools.

SeminarNeuroscience

SSFN Webinar - Pain research

Patrik Ernfors
Karolinska Institute
May 13, 2025
SeminarNeuroscience

Harnessing Big Data in Neuroscience: From Mapping Brain Connectivity to Predicting Traumatic Brain Injury

Franco Pestilli
University of Texas, Austin, USA
May 12, 2025

Neuroscience is experiencing unprecedented growth in dataset size both within individual brains and across populations. Large-scale, multimodal datasets are transforming our understanding of brain structure and function, creating opportunities to address previously unexplored questions. However, managing this increasing data volume requires new training and technology approaches. Modern data technologies are reshaping neuroscience by enabling researchers to tackle complex questions within a Ph.D. or postdoctoral timeframe. I will discuss cloud-based platforms such as brainlife.io, that provide scalable, reproducible, and accessible computational infrastructure. Modern data technology can democratize neuroscience, accelerate discovery and foster scientific transparency and collaboration. Concrete examples will illustrate how these technologies can be applied to mapping brain connectivity, studying human learning and development, and developing predictive models for traumatic brain injury (TBI). By integrating cloud computing and scalable data-sharing frameworks, neuroscience can become more impactful, inclusive, and data-driven..

SeminarNeuroscience

Recent views on pre-registration

Andy Jahn
University of Michigan
May 1, 2025

A discussion on some recent perspectives on pre-registration, which has become a growing trend in the past few years. This is not just limited to neuroimaging, and it applies to most scientific fields. We will start with this overview editorial by Simmons et al. (2021): https://faculty.wharton.upenn.edu/wp-content/uploads/2016/11/34-Simmons-Nelson-Simonsohn-2021a.pdf, and also talk about a more critical perspective by Pham & Oh (2021): https://www.researchgate.net/profile/Michel-Pham/publication/349545600_Preregistration_Is_Neither_Sufficient_nor_Necessary_for_Good_Science/links/60fb311e2bf3553b29096aa7/Preregistration-Is-Neither-Sufficient-nor-Necessary-for-Good-Science.pdf. I would like us to discuss the pros and cons of pre-registration, and if we have time, I may do a demonstration of how to perform a pre-registration through the Open Science Framework.

SeminarPsychology

Deepfake emotional expressions trigger the uncanny valley brain response, even when they are not recognised as fake

Casey Becker
University of Pittsburgh
Apr 15, 2025

Facial expressions are inherently dynamic, and our visual system is sensitive to subtle changes in their temporal sequence. However, researchers often use dynamic morphs of photographs—simplified, linear representations of motion—to study the neural correlates of dynamic face perception. To explore the brain's sensitivity to natural facial motion, we constructed a novel dynamic face database using generative neural networks, trained on a verified set of video-recorded emotional expressions. The resulting deepfakes, consciously indistinguishable from videos, enabled us to separate biological motion from photorealistic form. Results showed that conventional dynamic morphs elicit distinct responses in the brain compared to videos and photos, suggesting they violate expectations (n400) and have reduced social salience (late positive potential). This suggests that dynamic morphs misrepresent facial dynamism, resulting in misleading insights about the neural and behavioural correlates of face perception. Deepfakes and videos elicited largely similar neural responses, suggesting they could be used as a proxy for real faces in vision research, where video recordings cannot be experimentally manipulated. And yet, despite being consciously undetectable as fake, deepfakes elicited an expectation violation response in the brain. This points to a neural sensitivity to naturalistic facial motion, beyond conscious awareness. Despite some differences in neural responses, the realism and manipulability of deepfakes make them a valuable asset for research where videos are unfeasible. Using these stimuli, we proposed a novel marker for the conscious perception of naturalistic facial motion – Frontal delta activity – which was elevated for videos and deepfakes, but not for photos or dynamic morphs.

SeminarNeuroscience

Decoding ketamine: Neurobiological mechanisms underlying its rapid antidepressant efficacy

Zanos Panos
Translational Neuropharmacology Lab, University of Cyprus, Center for Applied Neurosience & Department of Psychology, Nicosia, Cyprus
Apr 3, 2025

Unlike traditional monoamine-based antidepressants that require weeks to exert effects, ketamine alleviates depression within hours, though its clinical use is limited by side effects. While ketamine was initially thought to work primarily through NMDA receptor (NMDAR) inhibition, our research reveals a more complex mechanism. We demonstrate that NMDAR inhibition alone cannot explain ketamine's sustained antidepressant effects, as other NMDAR antagonists like MK-801 lack similar efficacy. Instead, the (2R,6R)-hydroxynorketamine (HNK) metabolite appears critical, exhibiting antidepressant effects without ketamine's side effects. Paradoxically, our findings suggest an inverted U-shaped dose-response relationship where excessive NMDAR inhibition may actually impede antidepressant efficacy, while some level of NMDAR activation is necessary. The antidepressant actions of ketamine and (2R,6R)-HNK require AMPA receptor activation, leading to synaptic potentiation and upregulation of AMPA receptor subunits GluA1 and GluA2. Furthermore, NMDAR subunit GluN2A appears necessary and possibly sufficient for these effects. This research establishes NMDAR-GluN2A activation as a common downstream effector for rapid-acting antidepressants, regardless of their initial targets, offering promising directions for developing next-generation antidepressants with improved efficacy and reduced side effects.

SeminarNeuroscience

SSFN Webinar - Hearing Research

Anders Fridberger
Linköping University
Mar 27, 2025
Conference

COSYNE 2025

Montreal, Canada
Mar 27, 2025

The COSYNE 2025 conference was held in Montreal with post-conference workshops in Mont-Tremblant, continuing to provide a premier forum for computational and systems neuroscience. Attendees exchanged cutting-edge research in a single-track main meeting and in-depth specialized workshops, reflecting Cosyne’s mission to understand how neural systems function:contentReference[oaicite:6]{index=6}:contentReference[oaicite:7]{index=7}.

SeminarNeuroscienceRecording

Brain Emulation Challenge Workshop

Janne K. Lappalainen
University of Tübingen and Max Planck Research School for Intelligent Systems
Feb 21, 2025

Brain Emulation Challenge workshop will tackle cutting-edge topics such as ground-truthing for validation, leveraging artificial datasets generated from virtual brain tissue, and the transformative potential of virtual brain platforms, such as applied to the forthcoming Brain Emulation Challenge.

SeminarNeuroscience

Structural & Functional Neuroplasticity in Children with Hemiplegia

Christos Papadelis
University of Texas at Arlington
Feb 20, 2025

About 30% of children with cerebral palsy have congenital hemiplegia, resulting from periventricular white matter injury, which impairs the use of one hand and disrupts bimanual co-ordination. Congenital hemiplegia has a profound effect on each child's life and, thus, is of great importance to the public health. Changes in brain organization (neuroplasticity) often occur following periventricular white matter injury. These changes vary widely depending on the timing, location, and extent of the injury, as well as the functional system involved. Currently, we have limited knowledge of neuroplasticity in children with congenital hemiplegia. As a result, we provide rehabilitation treatment to these children almost blindly based exclusively on behavioral data. In this talk, I will present recent research evidence of my team on understanding neuroplasticity in children with congenital hemiplegia by using a multimodal neuroimaging approach that combines data from structural and functional neuroimaging methods. I will further present preliminary data regarding functional improvements of upper extremities motor and sensory functions as a result of rehabilitation with a robotic system that involves active participation of the child in a video-game setup. Our research is essential for the development of novel or improved neurological rehabilitation strategies for children with congenital hemiplegia.

SeminarNeuroscience

LRRK2 – a master regulator of neurodegeneration: acting on multiple systems including neuroinflammatory signaling, vesicular trafficking, and cell death pathways

Hardy Rideout
Biomedical Research Foundation, Academy of Athens
Feb 20, 2025
SeminarNeuroscience

Vision for perception versus vision for action: dissociable contributions of visual sensory drives from primary visual cortex and superior colliculus neurons to orienting behaviors

Prof. Dr. Ziad M. Hafed
Werner Reichardt Center for Integrative Neuroscience, and Hertie Institute for Clinical Brain Research University of Tübingen
Feb 11, 2025

The primary visual cortex (V1) directly projects to the superior colliculus (SC) and is believed to provide sensory drive for eye movements. Consistent with this, a majority of saccade-related SC neurons also exhibit short-latency, stimulus-driven visual responses, which are additionally feature-tuned. However, direct neurophysiological comparisons of the visual response properties of the two anatomically-connected brain areas are surprisingly lacking, especially with respect to active looking behaviors. I will describe a series of experiments characterizing visual response properties in primate V1 and SC neurons, exploring feature dimensions like visual field location, spatial frequency, orientation, contrast, and luminance polarity. The results suggest a substantial, qualitative reformatting of SC visual responses when compared to V1. For example, SC visual response latencies are actively delayed, independent of individual neuron tuning preferences, as a function of increasing spatial frequency, and this phenomenon is directly correlated with saccadic reaction times. Such “coarse-to-fine” rank ordering of SC visual response latencies as a function of spatial frequency is much weaker in V1, suggesting a dissociation of V1 responses from saccade timing. Consistent with this, when we next explored trial-by-trial correlations of individual neurons’ visual response strengths and visual response latencies with saccadic reaction times, we found that most SC neurons exhibited, on a trial-by-trial basis, stronger and earlier visual responses for faster saccadic reaction times. Moreover, these correlations were substantially higher for visual-motor neurons in the intermediate and deep layers than for more superficial visual-only neurons. No such correlations existed systematically in V1. Thus, visual responses in SC and V1 serve fundamentally different roles in active vision: V1 jumpstarts sensing and image analysis, but SC jumpstarts moving. I will finish by demonstrating, using V1 reversible inactivation, that, despite reformatting of signals from V1 to the brainstem, V1 is still a necessary gateway for visually-driven oculomotor responses to occur, even for the most reflexive of eye movement phenomena. This is a fundamental difference from rodent studies demonstrating clear V1-independent processing in afferent visual pathways bypassing the geniculostriate one, and it demonstrates the importance of multi-species comparisons in the study of oculomotor control.

SeminarNeuroscience

Memory formation in hippocampal microcircuit

Andreakos Nikolaos
Visiting Scientist, School of Computer Science, University of Lincoln, Scientific Associate, National and Kapodistrian University of Athens
Feb 6, 2025

The centre of memory is the medial temporal lobe (MTL) and especially the hippocampus. In our research, a more flexible brain-inspired computational microcircuit of the CA1 region of the mammalian hippocampus was upgraded and used to examine how information retrieval could be affected under different conditions. Six models (1-6) were created by modulating different excitatory and inhibitory pathways. The results showed that the increase in the strength of the feedforward excitation was the most effective way to recall memories. In other words, that allows the system to access stored memories more accurately.

SeminarNeuroscience

Brain macrophage transplantation for research and therapy development

Chris Bennett
University of Pennsilvania
Jan 29, 2025
SeminarNeuroscience

Neurobiological Pathways to Tau-dependent Pathology: Perspectives from flies to humans

Papanikolopoulou Katerina
Biomedical Sciences Research Centre "Alexander Fleming
Jan 23, 2025
SeminarNeuroscienceRecording

Dynamics of braille letter perception in blind readers

Santani Teng
Smith-Kettlewell Eye Research Institute
Jan 22, 2025
SeminarNeuroscienceRecording

Rethinking Attention: Dynamic Prioritization

Sarah Shomstein
George Washington University
Jan 6, 2025

Decades of research on understanding the mechanisms of attentional selection have focused on identifying the units (representations) on which attention operates in order to guide prioritized sensory processing. These attentional units fit neatly to accommodate our understanding of how attention is allocated in a top-down, bottom-up, or historical fashion. In this talk, I will focus on attentional phenomena that are not easily accommodated within current theories of attentional selection – the “attentional platypuses,” as they allude to an observation that within biological taxonomies the platypus does not fit into either mammal or bird categories. Similarly, attentional phenomena that do not fit neatly within current attentional models suggest that current models need to be revised. I list a few instances of the ‘attentional platypuses” and then offer a new approach, the Dynamically Weighted Prioritization, stipulating that multiple factors impinge onto the attentional priority map, each with a corresponding weight. The interaction between factors and their corresponding weights determines the current state of the priority map which subsequently constrains/guides attention allocation. I propose that this new approach should be considered as a supplement to existing models of attention, especially those that emphasize categorical organizations.

SeminarNeuroscience

Rett syndrome, MECP2 and therapeutic strategies

Rudolf Jaenisch
Whitehead Institute for Biomedical Research and Department of Biology, MIT, Cambridge, USA
Dec 10, 2024

The development of the iPS cell technology has revolutionized our ability to study development and diseases in defined in vitro cell culture systems. The talk will focus on Rett Syndrome and discuss two topics: (i) the use of gene editing as an approach to therapy and (ii) the role of MECP2 in gene expression (i) The mutation of the X-linked MECP2 gene is causative for the disease. In a female patient, every cell has a wt copy that is, however, in 50% of the cells located on the inactive X chromosome. We have used epigenetic gene editing tools to activate the wt MECP2 allele on the inactive X chromosome. (ii) MECP2 is thought to act as repressor of gene expression. I will present data which show that MECP2 binds to Pol II and acts as an activator for thousands of genes. The target genes are significantly enriched for Autism related genes. Our data challenge the established model of MECP2’s role in gene expression and suggest novel therapeutic approaches.

SeminarOpen SourceRecording

Towards open meta-research in neuroimaging

Kendra Oudyk
ORIGAMI - Neural data science - https://neurodatascience.github.io/
Dec 8, 2024

When meta-research (research on research) makes an observation or points out a problem (such as a flaw in methodology), the project should be repeated later to determine whether the problem remains. For this we need meta-research that is reproducible and updatable, or living meta-research. In this talk, we introduce the concept of living meta-research, examine prequels to this idea, and point towards standards and technologies that could assist researchers in doing living meta-research. We introduce technologies like natural language processing, which can help with automation of meta-research, which in turn will make the research easier to reproduce/update. Further, we showcase our open-source litmining ecosystem, which includes pubget (for downloading full-text journal articles), labelbuddy (for manually extracting information), and pubextract (for automatically extracting information). With these tools, you can simplify the tedious data collection and information extraction steps in meta-research, and then focus on analyzing the text. We will then describe some living meta-research projects to illustrate the use of these tools. For example, we’ll show how we used GPT along with our tools to extract information about study participants. Essentially, this talk will introduce you to the concept of meta-research, some tools for doing meta-research, and some examples. Particularly, we want you to take away the fact that there are many interesting open questions in meta-research, and you can easily learn the tools to answer them. Check out our tools at https://litmining.github.io/

SeminarNeuroscience

Screen Savers : Protecting adolescent mental health in a digital world

Amy Orben
University of Cambridge UK
Dec 2, 2024

In our rapidly evolving digital world, there is increasing concern about the impact of digital technologies and social media on the mental health of young people. Policymakers and the public are nervous. Psychologists are facing mounting pressures to deliver evidence that can inform policies and practices to safeguard both young people and society at large. However, research progress is slow while technological change is accelerating.My talk will reflect on this, both as a question of psychological science and metascience. Digital companies have designed highly popular environments that differ in important ways from traditional offline spaces. By revisiting the foundations of psychology (e.g. development and cognition) and considering digital changes' impact on theories and findings, we gain deeper insights into questions such as the following. (1) How do digital environments exacerbate developmental vulnerabilities that predispose young people to mental health conditions? (2) How do digital designs interact with cognitive and learning processes, formalised through computational approaches such as reinforcement learning or Bayesian modelling?However, we also need to face deeper questions about what it means to do science about new technologies and the challenge of keeping pace with technological advancements. Therefore, I discuss the concept of ‘fast science’, where, during crises, scientists might lower their standards of evidence to come to conclusions quicker. Might psychologists want to take this approach in the face of technological change and looming concerns? The talk concludes with a discussion of such strategies for 21st-century psychology research in the era of digitalization.

SeminarOpen Source

“Open Raman Microscopy (ORM): A modular Raman spectroscopy setup with an open-source controller”

Kevin Uning
London Centre for Nanotechnology (LCN), University College London (UCL)
Nov 28, 2024

Raman spectroscopy is a powerful technique for identifying chemical species by probing their vibrational energy levels, offering exceptional specificity with a relatively simple setup involving a laser source, spectrometer, and microscope/probe. However, the high cost of Raman systems lacking modularity often limits exploratory research hindering broader adoption. To address the need for an affordable, modular microscopy platform for multimodal imaging, we present a customizable confocal Raman spectroscopy setup alongside an open-source acquisition software, ORM (Open Raman Microscopy) Controller, developed in Python. This solution bridges the gap between expensive commercial systems and complex, custom-built setups used by specialist research groups. In this presentation, we will cover the components of the setup, the design rationale, assembly methods, limitations, and its modular potential for expanding functionality. Additionally, we will demonstrate ORM’s capabilities for instrument control, 2D and 3D Raman mapping, region-of-interest selection, and its adaptability to various instrument configurations. We will conclude by showcasing practical applications of this setup across different research fields.

SeminarNeuroscience

Sensory cognition

SueYeon Chung, Srini Turaga
New York University; Janelia Research Campus
Nov 28, 2024

This webinar features presentations from SueYeon Chung (New York University) and Srinivas Turaga (HHMI Janelia Research Campus) on theoretical and computational approaches to sensory cognition. Chung introduced a “neural manifold” framework to capture how high-dimensional neural activity is structured into meaningful manifolds reflecting object representations. She demonstrated that manifold geometry—shaped by radius, dimensionality, and correlations—directly governs a population’s capacity for classifying or separating stimuli under nuisance variations. Applying these ideas as a data analysis tool, she showed how measuring object-manifold geometry can explain transformations along the ventral visual stream and suggested that manifold principles also yield better self-supervised neural network models resembling mammalian visual cortex. Turaga described simulating the entire fruit fly visual pathway using its connectome, modeling 64 key cell types in the optic lobe. His team’s systematic approach—combining sparse connectivity from electron microscopy with simple dynamical parameters—recapitulated known motion-selective responses and produced novel testable predictions. Together, these studies underscore the power of combining connectomic detail, task objectives, and geometric theories to unravel neural computations bridging from stimuli to cognitive functions.

SeminarNeuroscience

Brain circuits for spatial navigation

Ann Hermundstad, Ila Fiete, Barbara Webb
Janelia Research Campus; MIT; University of Edinburgh
Nov 28, 2024

In this webinar on spatial navigation circuits, three researchers—Ann Hermundstad, Ila Fiete, and Barbara Webb—discussed how diverse species solve navigation problems using specialized yet evolutionarily conserved brain structures. Hermundstad illustrated the fruit fly’s central complex, focusing on how hardwired circuit motifs (e.g., sinusoidal steering curves) enable rapid, flexible learning of goal-directed navigation. This framework combines internal heading representations with modifiable goal signals, leveraging activity-dependent plasticity to adapt to new environments. Fiete explored the mammalian head-direction system, demonstrating how population recordings reveal a one-dimensional ring attractor underlying continuous integration of angular velocity. She showed that key theoretical predictions—low-dimensional manifold structure, isometry, uniform stability—are experimentally validated, underscoring parallels to insect circuits. Finally, Webb described honeybee navigation, featuring path integration, vector memories, route optimization, and the famous waggle dance. She proposed that allocentric velocity signals and vector manipulation within the central complex can encode and transmit distances and directions, enabling both sophisticated foraging and inter-bee communication via dance-based cues.

SeminarNeuroscience

LLMs and Human Language Processing

Maryia Toneva, Ariel Goldstein, Jean-Remi King
Max Planck Institute of Software Systems; Hebrew University; École Normale Supérieure
Nov 28, 2024

This webinar convened researchers at the intersection of Artificial Intelligence and Neuroscience to investigate how large language models (LLMs) can serve as valuable “model organisms” for understanding human language processing. Presenters showcased evidence that brain recordings (fMRI, MEG, ECoG) acquired while participants read or listened to unconstrained speech can be predicted by representations extracted from state-of-the-art text- and speech-based LLMs. In particular, text-based LLMs tend to align better with higher-level language regions, capturing more semantic aspects, while speech-based LLMs excel at explaining early auditory cortical responses. However, purely low-level features can drive part of these alignments, complicating interpretations. New methods, including perturbation analyses, highlight which linguistic variables matter for each cortical area and time scale. Further, “brain tuning” of LLMs—fine-tuning on measured neural signals—can improve semantic representations and downstream language tasks. Despite open questions about interpretability and exact neural mechanisms, these results demonstrate that LLMs provide a promising framework for probing the computations underlying human language comprehension and production at multiple spatiotemporal scales.

SeminarNeuroscience

How do we sleep?

William Wisden
Dept Life Sciences & UK Dementia Research Institute, Imperial College London, UK
Nov 27, 2024

There is no consensus on if sleep is for the brain, body or both. But the difference in how we feel following disrupted sleep or having a good night of continuous sleep is striking. Understanding how and why we sleep will likely give insights into many aspects of health. In this talk I will outline our recent work on how the prefrontal cortex can signal to the hypothalamus to regulate sleep preparatory behaviours and sleep itself, and how other brain regions, including the ventral tegmental area, respond to psychosocial stress to induce beneficial sleep. I will also outline our work on examining the function of the glymphatic system, and whether clearance of molecules from the brain is enhanced during sleep or wakefulness.

SeminarNeuroscience

Dynamic neurochemistry in conscious humans during stereoEEG monitoring

Read Montague
Fralin Biomedical Research Institute at Virginia Tech
Nov 13, 2024
SeminarNeuroscience

Clonal analysis at single cell level helps to understand neural crest development

Igor Adameyko
Medical University of Vienna; Karolinska Institutet
Nov 12, 2024

Recent research on the neural crest has revealed the multipotency and plasticity of nerve-associated Schwann cell precursors, which can differentiate into diverse cell types, including parasympathetic neurons, neuroendocrine cells, and mesenchymal stem cells. These findings challenge the traditional view of peripheral nerves, highlighting their role as niches for migratory progenitor cells that contribute to tissue formation and regeneration.

SeminarNeuroscience

Decomposing motivation into value and salience

Philippe Tobler
University of Zurich
Oct 31, 2024

Humans and other animals approach reward and avoid punishment and pay attention to cues predicting these events. Such motivated behavior thus appears to be guided by value, which directs behavior towards or away from positively or negatively valenced outcomes. Moreover, it is facilitated by (top-down) salience, which enhances attention to behaviorally relevant learned cues predicting the occurrence of valenced outcomes. Using human neuroimaging, we recently separated value (ventral striatum, posterior ventromedial prefrontal cortex) from salience (anterior ventromedial cortex, occipital cortex) in the domain of liquid reward and punishment. Moreover, we investigated potential drivers of learned salience: the probability and uncertainty with which valenced and non-valenced outcomes occur. We find that the brain dissociates valenced from non-valenced probability and uncertainty, which indicates that reinforcement matters for the brain, in addition to information provided by probability and uncertainty alone, regardless of valence. Finally, we assessed learning signals (unsigned prediction errors) that may underpin the acquisition of salience. Particularly the insula appears to be central for this function, encoding a subjective salience prediction error, similarly at the time of positively and negatively valenced outcomes. However, it appears to employ domain-specific time constants, leading to stronger salience signals in the aversive than the appetitive domain at the time of cues. These findings explain why previous research associated the insula with both valence-independent salience processing and with preferential encoding of the aversive domain. More generally, the distinction of value and salience appears to provide a useful framework for capturing the neural basis of motivated behavior.

SeminarNeuroscience

Sensory tuning in neuronal movement commands

Attempto Prize Awardee II Matthias P. Baumann
Hertie Institute for Clinical Brain Research, Tübingen
Oct 30, 2024
SeminarNeuroscience

Animal Research: Time to Talk!

Kirk Leech
European Animal Research Association
Oct 15, 2024
SeminarNeuroscience

Beyond Homogeneity: Characterizing Brain Disorder Heterogeneity through EEG and Normative Modeling

Mahmoud Hassan
Founder and CEO of MINDIG, Rennes, France. Adjunct professor, Reykjavik University, Reykjavik, Iceland.
Oct 8, 2024

Electroencephalography (EEG) has been thoroughly studied for decades in psychiatry research. Yet its integration into clinical practice as a diagnostic/prognostic tool remains unachieved. We hypothesize that a key reason is the underlying patient's heterogeneity, overlooked in psychiatric EEG research relying on a case-control approach. We combine HD-EEG with normative modeling to quantify this heterogeneity using two well-established and extensively investigated EEG characteristics -spectral power and functional connectivity- across a cohort of 1674 patients with attention-deficit/hyperactivity disorder, autism spectrum disorder, learning disorder, or anxiety, and 560 matched controls. Normative models showed that deviations from population norms among patients were highly heterogeneous and frequency-dependent. Deviation spatial overlap across patients did not exceed 40% and 24% for spectral and connectivity, respectively. Considering individual deviations in patients has significantly enhanced comparative analysis, and the identification of patient-specific markers has demonstrated a correlation with clinical assessments, representing a crucial step towards attaining precision psychiatry through EEG.

SeminarOpen SourceRecording

Trackoscope: A low-cost, open, autonomous tracking microscope for long-term observations of microscale organisms

Priya Soneji
Georgia Institute of Technology
Oct 7, 2024

Cells and microorganisms are motile, yet the stationary nature of conventional microscopes impedes comprehensive, long-term behavioral and biomechanical analysis. The limitations are twofold: a narrow focus permits high-resolution imaging but sacrifices the broader context of organism behavior, while a wider focus compromises microscopic detail. This trade-off is especially problematic when investigating rapidly motile ciliates, which often have to be confined to small volumes between coverslips affecting their natural behavior. To address this challenge, we introduce Trackoscope, an 2-axis autonomous tracking microscope designed to follow swimming organisms ranging from 10μm to 2mm across a 325 square centimeter area for extended durations—ranging from hours to days—at high resolution. Utilizing Trackoscope, we captured a diverse array of behaviors, from the air-water swimming locomotion of Amoeba to bacterial hunting dynamics in Actinosphaerium, walking gait in Tardigrada, and binary fission in motile Blepharisma. Trackoscope is a cost-effective solution well-suited for diverse settings, from high school labs to resource-constrained research environments. Its capability to capture diverse behaviors in larger, more realistic ecosystems extends our understanding of the physics of living systems. The low-cost, open architecture democratizes scientific discovery, offering a dynamic window into the lives of previously inaccessible small aquatic organisms.

SeminarNeuroscience

How the brain barriers ensure CNSimmune privilege”

Britta Engelhardt
Theodor Kocher Institute, University of Bern, Switzerland
Sep 25, 2024

Britta Engelhard’s research is devoted to understanding thefunction of the different brain barriers in regulating CNS immunesurveillance and how their impaired function contributes toneuroinflammatory diseases such as Multiple Sclerosis (MS) orAlzheimer’s disease (AD). Her laboratory combines expertise invascular biology, neuroimmunology and live cell imaging and hasdeveloped sophisticated in vitro and in vivo approaches to studyimmune cell interactions with the brain barriers in health andneuroinflammation.

SeminarPsychology

Comparing supervised learning dynamics: Deep neural networks match human data efficiency but show a generalisation lag

Lukas Huber
University of Bern
Sep 22, 2024

Recent research has seen many behavioral comparisons between humans and deep neural networks (DNNs) in the domain of image classification. Often, comparison studies focus on the end-result of the learning process by measuring and comparing the similarities in the representations of object categories once they have been formed. However, the process of how these representations emerge—that is, the behavioral changes and intermediate stages observed during the acquisition—is less often directly and empirically compared. In this talk, I'm going to report a detailed investigation of the learning dynamics in human observers and various classic and state-of-the-art DNNs. We develop a constrained supervised learning environment to align learning-relevant conditions such as starting point, input modality, available input data and the feedback provided. Across the whole learning process we evaluate and compare how well learned representations can be generalized to previously unseen test data. Comparisons across the entire learning process indicate that DNNs demonstrate a level of data efficiency comparable to human learners, challenging some prevailing assumptions in the field. However, our results also reveal representational differences: while DNNs' learning is characterized by a pronounced generalisation lag, humans appear to immediately acquire generalizable representations without a preliminary phase of learning training set-specific information that is only later transferred to novel data.

SeminarNeuroscienceRecording

Principles of Cognitive Control over Task Focus and Task

Tobias Egner
Duke University, USA
Sep 10, 2024

2024 BACN Mid-Career Prize Lecture Adaptive behavior requires the ability to focus on a current task and protect it from distraction (cognitive stability), and to rapidly switch tasks when circumstances change (cognitive flexibility). How people control task focus and switch-readiness has therefore been the target of burgeoning research literatures. Here, I review and integrate these literatures to derive a cognitive architecture and functional rules underlying the regulation of stability and flexibility. I propose that task focus and switch-readiness are supported by independent mechanisms whose strategic regulation is nevertheless governed by shared principles: both stability and flexibility are matched to anticipated challenges via an incremental, online learner that nudges control up or down based on the recent history of task demands (a recency heuristic), as well as via episodic reinstatement when the current context matches a past experience (a recognition heuristic).

SeminarOpen Source

A Breakdown of the Global Open Science Hardware (GOSH) Movement

Tobias Wenzel, PhD. Assistant Professor at Pontificia Universidad Católica de Chile. Brianna Johns, BSc. Community Coordinator GOSH. Pablo Cremades, PhD. Coordinator of the Mendoza node of the reGOSH network.
Jul 16, 2024

This seminar, hosted by the LIBRE hub project, will provide an in-depth introduction to the Global Open Science Hardware (GOSH) movement. Since its inception, GOSH has been instrumental in advancing open-source hardware within scientific research, fostering a diverse and active community. The seminar will cover the history of GOSH, its current initiatives, and future opportunities, with a particular focus on the contributions and activities of the Latin American branch. This session aims to inform researchers, educators, and policy-makers about the significance and impact of GOSH in promoting accessibility and collaboration in science instrumentation.

SeminarNeuroscience

In vivo scalable investigation of gene functions in the brain

Xin Jin
Scripps Research
Jun 25, 2024
ePoster

Open-source solutions for research data management in neuroscience collaborations

Reema Gupta, Thomas Wachtler

Bernstein Conference 2024

ePoster

Advancing mechanotransduction research: Development and evaluation of an affordable membrane-based cell stretching device

Pervin Rukiye Dincer, Nilüfer Boustanabadimaralan Düz, Samet Akar, Ismail Uyanik

FENS Forum 2024

ePoster

Brazilian Neurobiodiversity Network – Cetacean Brain Collection Initiative for Morphological Research

Kamilla Souza, Heitor Mynssen, Vera M.F da Silva, Vanessa Lanes Ribeiro, Miriam Marmontel, Gabriel Melo-Santos, Vitor Luz Carvalho, Khallil Taverna Chaim, Milton Marcondes, Flávio Lima, Haydée Andrade-Cunha, Nina Patzke, Bruno Mota

FENS Forum 2024

ePoster

Comprehensive whole rat brain analysis: Expanding rat brain research with enhanced imaging and computational tools

Grace Houser, Jaspreet Kaur, Amaia Diego Ajenjo, Madelaine Bonfils, Salif Komi, Rune Berg

FENS Forum 2024

ePoster

Evaluation of the biological effects of near infrared illumination and biomarker research on the late stages of Parkinson's disease in a novel mouse model

Marie Vionnet, Denis Mariolle, Istvan Horvath, Ranjeet Kumar, Pernilla Wittung-Stafshede, Christel Marquette, Jenny Molet

FENS Forum 2024

ePoster

Exploring analytical procedures and short channels in fNIRS research: Insights and implications

Yann Lemaire, Jérémie Ginzburg, Olivier Deguine, Pascal Barone, Anne Caclin

FENS Forum 2024

ePoster

Expression of the endocannabinoid system in the visual cortex: Implications for cannabinoid research

Catarina Micaelo Fernandes, Hamza Haïmeur, Jean-François Bouchard, Maurice Ptito

FENS Forum 2024

ePoster

The importance of housing conditions in implementing the sex as a biological variable (SABV) policy in neuroscience rodent research

Ivana Jaric, Océane La Loggia, Jovana Malikovic, Marc W Schmid, Janja Novak, Bernhard Voelkl, Irmgard Amrein, Hanno Würbel

FENS Forum 2024

ePoster

Innovative models for amyotrophic lateral sclerosis research: Dermal fibroblasts and direct cell reprogramming

Lucía Gallego, Víctor Álvaro-Sánchez, Ana Martínez, Sergio Gascón

FENS Forum 2024

ePoster

Integrating project management principles for efficient neuroscience research

Pranav Joshi, Gargi Ray, Abhipradnya Wahul

FENS Forum 2024

ePoster

Introducing Psy-ShareD (Psychosis MRI Shared Data Resource): A new global MRI repository for all psychosis researchers

Simon Evans, Matthew Kempton, Veena Kumari, Rachel Upthegrove, Paul Allen

FENS Forum 2024

ePoster

Investigating the effects of chronic aerobic exercise on cognitive deficits and inflammatory markers in the sub-chronic phencyclidine mouse model for schizophrenia research

Katie Landreth, Mariam Huertas Radi, Michael Harte, John Gigg

FENS Forum 2024

ePoster

SHAREbrain: An interactive, integrative, and modular approach to standardise advanced functional neurophysiology data and metadata for sharing and reuse via the EBRAINS Research Infrastructure

Eivind Hennestad, Laura Bojarskaite, Rune Enger, Koen Vervaeke, Mikkel Elle Lepperød, Jan G. Bjaalie, Charlotte Boccara, Torkel Hafting, Marianne Fyhn, Trygve B. Leergaard

FENS Forum 2024

ePoster

Automated Research Workflows for Pose Estimation

Chris Brozdowski

Neuromatch 5

ePoster

Research Methods in Cognition Studies & Phenomenology - Challenges and Opportunities

Amanda Nelson

Neuromatch 5