Topological Data Analysis
topological data analysis
Arvind Kumar
We are looking for up to 5 postdocs. Each selected candidate will work in close collaboration with other PIs in the dBrain consortium (see below), including researchers and clinicians at Karolinska Institute and Karolinska Hospital. https://www.digitalfutures.kth.se/research/collaborative-projects/dbrain/ dBRAIN is an interdisciplinary initiative within the ‘Digital Futures’ initiative at KTH Royal Institute of Technology, Stockholm (https://www.digitalfutures.kth.se/research/collaborative-projects). The goal is to better understand neurodegenerative diseases such as Parkinson’s disease and Alzheimer’s disease. We combine computational modeling, machine learning and topological data analysis to identify causal links among disease biomarkers and disease symptoms. This understanding should improve diagnosis, prediction of the disease progression and suggest better therapies.
Rik Sarkar
We are looking for PhD students at the University of Edinburgh for research focused on: Machine learning and optimization algorithms, Generative AI and artificial data, Privacy, fairness and explainability, Topological and Geometric data analysis and other similar areas.
Tiago de Paula Peixoto
Call for 5 open-rank positions at IT:U — a new public university just founded in Austria. One of the focuses is Theoretical Foundations of Data Science — engaging with areas such as mathematics of data science, statistical learning, or specific topics like topological data analysis and causality. The concept of “Data Science” here is very broadly defined. The positions are attractive, and include permanent (i.e. recurring) funding for a number of PhD students and post-docs, depending on rank.
Space wrapped onto a grid cell torus
Entorhinal grid cells, so-called because of their hexagonally tiled spatial receptive fields, are organized in modules which, collectively, are believed to form a population code for the animal’s position. Here, we apply topological data analysis to simultaneous recordings of hundreds of grid cells and show that joint activity of grid cells within a module lies on a toroidal manifold. Each position of the animal in its physical environment corresponds to a single location on the torus, and each grid cell is preferentially active within a single “field” on the torus. Toroidal firing positions persist between environments, and between wakefulness and sleep, in agreement with continuous attractor models of grid cells.
Topological data analysis of cortical word representations in health and schizophrenia
FENS Forum 2024
Topological data analysis reveals brain connectivity differences between schizophrenia subjects and healthy controls
FENS Forum 2024