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Validation

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validation

Discover seminars, jobs, and research tagged with validation across World Wide.
30 curated items22 Seminars8 ePosters
Updated 4 months ago
30 items · validation
30 results
SeminarNeuroscience

OpenNeuro FitLins GLM: An Accessible, Semi-Automated Pipeline for OpenNeuro Task fMRI Analysis

Michael Demidenko
Stanford University
Jul 31, 2025

In this talk, I will discuss the OpenNeuro Fitlins GLM package and provide an illustration of the analytic workflow. OpenNeuro FitLins GLM is a semi-automated pipeline that reduces barriers to analyzing task-based fMRI data from OpenNeuro's 600+ task datasets. Created for psychology, psychiatry and cognitive neuroscience researchers without extensive computational expertise, this tool automates what is largely a manual process and compilation of in-house scripts for data retrieval, validation, quality control, statistical modeling and reporting that, in some cases, may require weeks of effort. The workflow abides by open-science practices, enhancing reproducibility and incorporates community feedback for model improvement. The pipeline integrates BIDS-compliant datasets and fMRIPrep preprocessed derivatives, and dynamically creates BIDS Statistical Model specifications (with Fitlins) to perform common mass univariate [GLM] analyses. To enhance and standardize reporting, it generates comprehensive reports which includes design matrices, statistical maps and COBIDAS-aligned reporting that is fully reproducible from the model specifications and derivatives. OpenNeuro Fitlins GLM has been tested on over 30 datasets spanning 50+ unique fMRI tasks (e.g., working memory, social processing, emotion regulation, decision-making, motor paradigms), reducing analysis times from weeks to hours when using high-performance computers, thereby enabling researchers to conduct robust single-study, meta- and mega-analyses of task fMRI data with significantly improved accessibility, standardized reporting and reproducibility.

SeminarPsychology

Digital Traces of Human Behaviour: From Political Mobilisation to Conspiracy Narratives

Lukasz Piwek
University of Bath & Cumulus Neuroscience Ltd
Jul 6, 2025

Digital platforms generate unprecedented traces of human behaviour, offering new methodological approaches to understanding collective action, polarisation, and social dynamics. Through analysis of millions of digital traces across multiple studies, we demonstrate how online behaviours predict offline action: Brexit-related tribal discourse responds to real-world events, machine learning models achieve 80% accuracy in predicting real-world protest attendance from digital signals, and social validation through "likes" emerges as a key driver of mobilization. Extending this approach to conspiracy narratives reveals how digital traces illuminate psychological mechanisms of belief and community formation. Longitudinal analysis of YouTube conspiracy content demonstrates how narratives systematically address existential, epistemic, and social needs, while examination of alt-tech platforms shows how emotions of anger, contempt, and disgust correlate with violence-legitimating discourse, with significant differences between narratives associated with offline violence versus peaceful communities. This work establishes digital traces as both methodological innovation and theoretical lens, demonstrating that computational social science can illuminate fundamental questions about polarisation, mobilisation, and collective behaviour across contexts from electoral politics to conspiracy communities.

SeminarOpen Source

“A Focus on 3D Printed Lenses: Rapid prototyping, low-cost microscopy and enhanced imaging for the life sciences”

Liam Rooney
University of Glasgow
May 21, 2025

High-quality glass lenses are commonplace in the design of optical instrumentation used across the biosciences. However, research-grade glass lenses are often costly, delicate and, depending on the prescription, can involve intricate and lengthy manufacturing - even more so in bioimaging applications. This seminar will outline 3D printing as a viable low-cost alternative for the manufacture of high-performance optical elements, where I will also discuss the creation of the world’s first fully 3D printed microscope and other implementations of 3D printed lenses. Our 3D printed lenses were generated using consumer-grade 3D printers and pose a 225x materials cost-saving compared to glass optics. Moreover, they can be produced in any lab or home environment and offer great potential for education and outreach. Following performance validation, our 3D printed optics were implemented in the production of a fully 3D printed microscope and demonstrated in histological imaging applications. We also applied low-cost fabrication methods to exotic lens geometries to enhance resolution and contrast across spatial scales and reveal new biological structures. Across these applications, our findings showed that 3D printed lenses are a viable substitute for commercial glass lenses, with the advantage of being relatively low-cost, accessible, and suitable for use in optical instruments. Combining 3D printed lenses with open-source 3D printed microscope chassis designs opens the doors for low-cost applications for rapid prototyping, low-resource field diagnostics, and the creation of cheap educational tools.

SeminarNeuroscienceRecording

Brain Emulation Challenge Workshop

Randal A. Koene
Co-Founder and Chief Science Officer, Carboncopies
Feb 21, 2025

Brain Emulation Challenge workshop will tackle cutting-edge topics such as ground-truthing for validation, leveraging artificial datasets generated from virtual brain tissue, and the transformative potential of virtual brain platforms, such as applied to the forthcoming Brain Emulation Challenge.

SeminarNeuroscienceRecording

Brain Emulation Challenge Workshop

Razvan Marinescu
Assistant Professor, UC Santa Cruz, Department of Computer Science and Engineering
Feb 21, 2025

Brain Emulation Challenge workshop will tackle cutting-edge topics such as ground-truthing for validation, leveraging artificial datasets generated from virtual brain tissue, and the transformative potential of virtual brain platforms, such as applied to the forthcoming Brain Emulation Challenge.

SeminarNeuroscienceRecording

Brain Emulation Challenge Workshop

Philip Shiu
Neuroscientist at A.I., Cognitive Science and Neurobiology Company, EON Systems
Feb 21, 2025

Brain Emulation Challenge workshop will tackle cutting-edge topics such as ground-truthing for validation, leveraging artificial datasets generated from virtual brain tissue, and the transformative potential of virtual brain platforms, such as applied to the forthcoming Brain Emulation Challenge.

SeminarNeuroscienceRecording

Brain Emulation Challenge Workshop

Janne K. Lappalainen
University of Tübingen and Max Planck Research School for Intelligent Systems
Feb 21, 2025

Brain Emulation Challenge workshop will tackle cutting-edge topics such as ground-truthing for validation, leveraging artificial datasets generated from virtual brain tissue, and the transformative potential of virtual brain platforms, such as applied to the forthcoming Brain Emulation Challenge.

SeminarNeuroscienceRecording

Brain network communication: concepts, models and applications

Caio Seguin
Indiana University
Aug 23, 2023

Understanding communication and information processing in nervous systems is a central goal of neuroscience. Over the past two decades, advances in connectomics and network neuroscience have opened new avenues for investigating polysynaptic communication in complex brain networks. Recent work has brought into question the mainstay assumption that connectome signalling occurs exclusively via shortest paths, resulting in a sprawling constellation of alternative network communication models. This Review surveys the latest developments in models of brain network communication. We begin by drawing a conceptual link between the mathematics of graph theory and biological aspects of neural signalling such as transmission delays and metabolic cost. We organize key network communication models and measures into a taxonomy, aimed at helping researchers navigate the growing number of concepts and methods in the literature. The taxonomy highlights the pros, cons and interpretations of different conceptualizations of connectome signalling. We showcase the utility of network communication models as a flexible, interpretable and tractable framework to study brain function by reviewing prominent applications in basic, cognitive and clinical neurosciences. Finally, we provide recommendations to guide the future development, application and validation of network communication models.

SeminarPsychology

The Effects of Negative Emotions on Mental Representation of Faces

Fabiana Lombardi
University of Winchester
Nov 22, 2022

Face detection is an initial step of many social interactions involving a comparison between a visual input and a mental representation of faces, built from previous experience. Whilst emotional state was found to affect the way humans attend to faces, little research has explored the effects of emotions on the mental representation of faces. Here, we examined the specific perceptual modulation of geometric properties of the mental representations associated with state anxiety and state depression on face detection, and to compare their emotional expression. To this end, we used an adaptation of the reverse correlation technique inspired by Gosselin and Schyns’, (2003) ‘Superstitious Approach’, to construct visual representations of observers’ mental representations of faces and to relate these to their mental states. In two sessions, on separate days, participants were presented with ‘colourful’ noise stimuli and asked to detect faces, which they were told were present. Based on the noise fragments that were identified as faces, we reconstructed the pictorial mental representation utilised by each participant in each session. We found a significant correlation between the size of the mental representation of faces and participants’ level of depression. Our findings provide a preliminary insight about the way emotions affect appearance expectation of faces. To further understand whether the facial expressions of participants’ mental representations reflect their emotional state, we are conducting a validation study with a group of naïve observers who are asked to classify the reconstructed face images by emotion. Thus, we assess whether the faces communicate participants’ emotional states to others.

SeminarPsychology

Emotions and Partner Phubbing: The Role of Understanding and Validation in Predicting Anger and Loneliness

Michal Frackowiak
University of Lausanne
Apr 19, 2022

Interactions between romantic partners may be disturbed by problematic mobile phone use, i.e., phubbing. Research shows that phubbing reduces the ability to be responsive, but emotional aspects of phubbing, such as experiences of anger and loneliness, have not been explored. Anger has been linked to partner blame in negative social interactions, whereas loneliness has been associated with low social acceptance. Moreover, two aspects of partner responsiveness, understanding and validation, refer to the ability to recognize partner’s perspective and convey acceptance of their point of view, respectively. High understanding and validation by partner have been found to prevent from negative affect during social interaction. The impact of understanding and validation on emotions has not been investigated in the context of phubbing, therefore we posit the following exploratory hypotheses. (1) Participants will report higher levels of anger and loneliness on days with phubbing by partner, compared to days without; (2) understanding and validation will moderate the relationship between phubbing intensity and levels of anger and loneliness. We conducted a daily diary study over seven days. Based on a sample of 133 participants in intimate relationships and living with their partners, we analyzed the nested within and between-person data using multilevel models. Participants reported higher levels of anger and loneliness on days they experienced phubbing. Both, understanding and validation, buffer the relationship between phubbing intensity and negative experiences, and the interaction effects indicate certain nuances between the two constructs. Our research provides a unique insight into how specific mechanisms related to couple interactions may explain experiences of anger and loneliness.

SeminarNeuroscienceRecording

NMC4 Short Talk: Decoding finger movements from human posterior parietal cortex

Charles Guan
California Institute of Technology
Dec 1, 2021

Restoring hand function is a top priority for individuals with tetraplegia. This challenge motivates considerable research on brain-computer interfaces (BCIs), which bypass damaged neural pathways to control paralyzed or prosthetic limbs. Here, we demonstrate the BCI control of a prosthetic hand using intracortical recordings from the posterior parietal cortex (PPC). As part of an ongoing clinical trial, two participants with cervical spinal cord injury were each implanted with a 96-channel array in the left PPC. Across four sessions each, we recorded neural activity while they attempted to press individual fingers of the contralateral (right) hand. Single neurons modulated selectively for different finger movements. Offline, we accurately classified finger movements from neural firing rates using linear discriminant analysis (LDA) with cross-validation (accuracy = 90%; chance = 17%). Finally, the participants used the neural classifier online to control all five fingers of a BCI hand. Online control accuracy (86%; chance = 17%) exceeded previous state-of-the-art finger BCIs. Furthermore, offline, we could classify both flexion and extension of the right fingers, as well as flexion of all ten fingers. Our results indicate that neural recordings from PPC can be used to control prosthetic fingers, which may help contribute to a hand restoration strategy for people with tetraplegia.

SeminarNeuroscience

Digitization as a driving force for collaboration in neuroscience

Michael Denker
Forschungszentrum Jülich
Jun 30, 2021

Many of the collaborations we encounter in our scientific careers are centered on a common idea that can be associated with certain resources, such as a dataset, an algorithm, or a model. All partners in a collaboration need to develop a common understanding of these resources, and need to be able to access them in a simple and unambiguous manner in order to avoid incorrect conclusions especially in highly cross-disciplinary contexts. While digital computers have entered to assist scientific workflows in experiment and simulation for many decades, the high degree of heterogeneity in the field had led to a scattered landscape of highly customized, lab-internal solutions to organizing and managing the resources on a project-by-project basis. Only with the availability of modern technologies such as the semantic web, platforms for collaborative coding or the development of data standards overarching different disciplines, we have tools at our disposal to make resources increasingly more accessible, understandable, and usable. However, without overarching standardization efforts and adaptation of such technologies to the workflows and needs of individual researchers, their adoption by the neuroscience community will be impeded. From the perspective of computational neuroscience, which is inherently dependent on leveraging data and methods across the field of neuroscience for inspiration and validation, I will outline my view on past and present developments towards a more rigorous use of digital resources and how they improved collaboration, and introduce emerging initiatives to support this process in the future (e.g., EBRAINS http://ebrains.eu, NFDI-Neuro http://www.nfdi-neuro.de).

SeminarPsychology

The Jena Voice Learning and Memory Test (JVLMT)

Romi Zäske
University of Jena
May 26, 2021

The ability to recognize someone’s voice spans a broad spectrum with phonagnosia on the low end and super recognition at the high end. Yet there is no standardized test to measure the individual ability to learn and recognize newly-learnt voices with samples of speech-like phonetic variability. We have developed the Jena Voice Learning and Memory Test (JVLMT), a 20 min-test based on item response theory and applicable across different languages. The JVLMT consists of three phases in which participants are familiarized with eight speakers in two stages and then perform a three-alternative forced choice recognition task, using pseudo sentences devoid of semantic content. Acoustic (dis)similarity analyses were used to create items with different levels of difficulty. Test scores are based on 22 Rasch-conform items. Items were selected and validated in online studies based on 232 and 454 participants, respectively. Mean accuracy is 0.51 with an SD of .18. The JVLMT showed high and moderate correlations with convergent validation tests (Bangor Voice Matching Test; Glasgow Voice Memory Test) and a weak correlation with a discriminant validation test (Digit Span). Empirical (marginal) reliability is 0.66. Four participants with super recognition (at least 2 SDs above the mean) and 7 participants with phonagnosia (at least 2 SDs below the mean) were identified. The JVLMT is a promising screen too for voice recognition abilities in a scientific and neuropsychological context.

SeminarNeuroscience

Contextual inference underlies the learning of sensorimotor repertoires

Daniel Wolpert
Columbia University
Oct 14, 2020

Humans spend a lifetime learning, storing and refining a repertoire of motor memories. However, it is unknown what principle underlies the way our continuous stream of sensori-motor experience is segmented into separate memories and how we adapt and use this growing repertoire. Here we develop a principled theory of motor learning based on the key insight that memory creation, updating, and expression are all controlled by a single computation – contextual inference. Unlike dominant theories of single-context learning, our repertoire-learning model accounts for key features of motor learning that had no unified explanation and predicts novel phenomena, which we confirm experimentally. These results suggest that contextual inference is the key principle underlying how a diverse set of experiences is reflected in motor behavior.

ePoster

Train/test behavioral cross-validation reveals neural correlates in mice

Miguel Angel Nunez-Ochoa, Fengtong Du, Lin Zhong, Scott Baptista, Carsen Stringer, Marius Pachitariu

COSYNE 2025

ePoster

Comparative transcriptome profiling of multiple human induced pluripotent stem cell-derived sensory neuron populations and functional validation of pain targets on automated patch clamp systems

Vincent Truong, Aaron Randolph, Irene Lu, Rita Cerone, Alison Obergrussberger, Rodolfo Haedo, Tim Strassmaier, Patrick Walsh

FENS Forum 2024

ePoster

Cross-validation under different sensory conditions reveals the practical validity of the MVUE model

Fatmagul Ibisoglu, Ismail Uyanik

FENS Forum 2024

ePoster

Integrating different approaches for establishing a multi-scale functional validation platform for RNA-based drugs in the CNS (MULTIVAL)

Chiara Adriana Elia, Sebastiano Bariselli, Antonella Borreca, Matteo Fossati, Marianna Leonzino, Davide Pozzi, Marco Rasile, Roberto Rusconi, Michela Matteoli, Simona Lodato, Maria Luisa Malosio

FENS Forum 2024

ePoster

Statistics versus animal welfare: Validation of the experimental unit in the focus of 3R

Miriam Vogt, Samantha K. Balcerzak, Till Merlin Lohr, Sabine Chourbaji

FENS Forum 2024

ePoster

Stratification of ALS progression by a combined motor and behavioural tracking approach for preclinical drug validation

Hanna Trebesova, Francesca Bacchetti, Matilde Balbi, Tiziana Bonifacino, Massimo Grilli, Marco Milanese

FENS Forum 2024

ePoster

Validation of template-based attenuation correction for in vivo quantification of the serotonin transporter using positron emission tomography

Christian Milz, Murray Bruce Reed, Matej Murgaš, Andreas Hahn, Rupert Lanzenberger

FENS Forum 2024

ePoster

Validation of portable, dry electrode-based electroencephalography device for application in brain–computer interface solutions

Melinda Rácz, János Csipor, István Ulbert, Gergely Márton

FENS Forum 2024