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Topic: OpenNeuro

Seminar
2 seminars

In Brain Imaging and Computer Science

Seminar · Neuro-Informatics

Observation to Knowledge: Harnessing Reproducible Practices to Accelerate Science

David Kennedy · University of Massachusetts

Tue, Nov 3, 2026 · 17:00 UTC

Reproducible research can turn scientific observations into reliable, reusable knowledge. This talk presents ReproNim and related community infrastructure for sharing data and computational workflows. It examines versioned, re-executable analysis at scale using OpenNeuro, together with harmonization and querying across dozens of research sites. ReproLakes and ReproPonds combine public and private metadata stores with FAIR and reproducible practices to improve discovery and reuse. The discussion addresses both technical obstacles and research-culture challenges, offering practical approaches fo

Seminar · Brain Imaging

OpenNeuro FitLins GLM: An Accessible, Semi-Automated Pipeline for OpenNeuro Task fMRI Analysis

Michael Demidenko · Stanford University

Fri, Aug 1, 2025 · 04:00 UTC

In this talk, I will discuss the OpenNeuro Fitlins GLM package and provide an illustration of the analytic workflow. OpenNeuro FitLins GLM is a semi-automated pipeline that reduces barriers to analyzing task-based fMRI data from OpenNeuro's 600+ task datasets. Created for psychology, psychiatry and cognitive neuroscience researchers without extensive computational expertise, this tool automates what is largely a manual process and compilation of in-house scripts for data retrieval, validation, quality control, statistical modeling and reporting that, in some cases, may require weeks of effort.