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Open SPM: A Modular Framework for Scanning Probe Microscopy
OpenSPM aims to democratize innovation in the field of scanning probe microscopy (SPM), which is currently dominated by a few proprietary, closed systems that limit user-driven development. Our platform includes a high-speed OpenAFM head and base optimized for small cantilevers, an OpenAFM controller, a high-voltage amplifier, and interfaces compatible with several commercial AFM systems such as the Bruker Multimode, Nanosurf DriveAFM, Witec Alpha SNOM, Zeiss FIB-SEM XB550, and Nenovision Litescope. We have created a fully documented and community-driven OpenSPM platform, with training resources and sourcing information, which has already enabled the construction of more than 15 systems outside our lab. The controller is integrated with open-source tools like Gwyddion, HDF5, and Pycroscopy. We have also engaged external companies, two of which are integrating our controller into their products or interfaces. We see growing interest in applying parts of the OpenSPM platform to related techniques such as correlated microscopy, nanoindentation, and scanning electron/confocal microscopy. To support this, we are developing more generic and modular software, alongside a structured development workflow. A key feature of the OpenSPM system is its Python-based API, which makes the platform fully scriptable and ideal for AI and machine learning applications. This enables, for instance, automatic control and optimization of PID parameters, setpoints, and experiment workflows. With a growing contributor base and industry involvement, OpenSPM is well positioned to become a global, open platform for next-generation SPM innovation.
Memory Decoding Journal Club: Reconstructing a new hippocampal engram for systems reconsolidation and remote memory updating
Join us for the Memory Decoding Journal Club, a collaboration between the Carboncopies Foundation and BPF Aspirational Neuroscience. This month, we're diving into a groundbreaking paper: 'Reconstructing a new hippocampal engram for systems reconsolidation and remote memory updating' by Bo Lei, Bilin Kang, Yuejun Hao, Haoyu Yang, Zihan Zhong, Zihan Zhai, and Yi Zhong from Tsinghua University, Beijing Academy of Artificial Intelligence, IDG/McGovern Institute of Brain Research, and Peking Union Medical College. Dr. Randal Koene will guide us through an engaging discussion on these exciting findings and their implications for neuroscience and memory research.
Decision and Behavior
This webinar addressed computational perspectives on how animals and humans make decisions, spanning normative, descriptive, and mechanistic models. Sam Gershman (Harvard) presented a capacity-limited reinforcement learning framework in which policies are compressed under an information bottleneck constraint. This approach predicts pervasive perseveration, stimulus‐independent “default” actions, and trade-offs between complexity and reward. Such policy compression reconciles observed action stochasticity and response time patterns with an optimal balance between learning capacity and performance. Jonathan Pillow (Princeton) discussed flexible descriptive models for tracking time-varying policies in animals. He introduced dynamic Generalized Linear Models (Sidetrack) and hidden Markov models (GLM-HMMs) that capture day-to-day and trial-to-trial fluctuations in choice behavior, including abrupt switches between “engaged” and “disengaged” states. These models provide new insights into how animals’ strategies evolve under learning. Finally, Kenji Doya (OIST) highlighted the importance of unifying reinforcement learning with Bayesian inference, exploring how cortical-basal ganglia networks might implement model-based and model-free strategies. He also described Japan’s Brain/MINDS 2.0 and Digital Brain initiatives, aiming to integrate multimodal data and computational principles into cohesive “digital brains.”
Exploring the cerebral mechanisms of acoustically-challenging speech comprehension - successes, failures and hope
Comprehending speech under acoustically challenging conditions is an everyday task that we can often execute with ease. However, accomplishing this requires the engagement of cognitive resources, such as auditory attention and working memory. The mechanisms that contribute to the robustness of speech comprehension are of substantial interest in the context of hearing mild to moderate hearing impairment, in which affected individuals typically report specific difficulties in understanding speech in background noise. Although hearing aids can help to mitigate this, they do not represent a universal solution, thus, finding alternative interventions is necessary. Given that age-related hearing loss (“presbycusis”) is inevitable, developing new approaches is all the more important in the context of aging populations. Moreover, untreated hearing loss in middle age has been identified as the most significant potentially modifiable predictor of dementia in later life. I will present research that has used a multi-methodological approach (fMRI, EEG, MEG and non-invasive brain stimulation) to try to elucidate the mechanisms that comprise the cognitive “last mile” in speech acousticallychallenging speech comprehension and to find ways to enhance them.
10 “simple rules” for socially responsible science
Guidelines concerning the potentially harmful effects of scientific studies have historically focused on minimizing risk for participants. However, studies can also indirectly inflict harm on individuals and social groups through how they are designed, reported, and disseminated. As evidenced by recent criticisms and retractions of high-profile studies dealing with a wide variety of social issues, there is a scarcity of resources and guidance on how one can conduct research in a socially responsible manner. As such, even motivated researchers might publish work that has negative social impacts due to a lack of awareness. To address this, we proposed 10 recommendations (“simple rules”) for researchers who wish to conduct more socially responsible science. These recommendations cover major considerations throughout the life cycle of a study from inception to dissemination. They are not aimed to be a prescriptive list or a deterministic code of conduct. Rather, they are meant to help motivated scientists to reflect on their social responsibility as researchers and actively engage with the potential social impact of their research.
Wildlife, Warriors and Women: Large Carnivore Conservation in Tanzania and Beyond
Professor Amy Dickman established is the joint CEO of Lion Landscapes, which works to help conserve wildlife in some of the most important biodiversity areas of Africa. These areas include some of the most important areas in the world for big cats, but also have an extremely high level of lion killing, as lions and other carnivores impose high costs on poverty-stricken local people. Amy and her team are working with local communities to reduce carnivore attacks, providing villagers with real benefits from carnivore presence, engaging warriors in conservation and training the next generation of local conservation leaders. It has been a challenging endeavour, given the remote location and secretive and hostile nature of the tribe responsible for most lion-killing. In her talk, Amy will discuss the significance of this project, the difficulties of working in an area where witchcraft and mythology abound, and the conservation successes that are already emerging from this important work.
Movements and engagement during decision-making
When experts are immersed in a task, a natural assumption is that their brains prioritize task-related activity. Accordingly, most efforts to understand neural activity during well-learned tasks focus on cognitive computations and task-related movements. Surprisingly, we observed that during decision-making, the cortex-wide activity of multiple cell types is dominated by movements, especially “uninstructed movements”, that are spontaneously expressed. These observations argue that animals execute expert decisions while performing richly varied, uninstructed movements that profoundly shape neural activity. To understand the relationship between these movements and decision-making, we examined the movements more closely. We tested whether the magnitude or the timing of the movements was correlated with decision-making performance. To do this, we partitioned movements into two groups: task-aligned movements that were well predicted by task events (such as the onset of the sensory stimulus or choice) and task independent movement (TIM) that occurred independently of task events. TIM had a reliable, inverse correlation with performance in head-restrained mice and freely moving rats. This hinted that the timing of spontaneous movements could indicate periods of disengagement. To confirm this, we compared TIM to the latent behavioral states recovered by a hidden Markov model with Bernoulli generalized linear model observations (GLM-HMM) and found these, again, to be inversely correlated. Finally, we examined the impact of these behavioral states on neural activity. Surprisingly, we found that the same movement impacts neural activity more strongly when animals are disengaged. An intriguing possibility is that these larger movement signals disrupt cognitive computations, leading to poor decision-making performance. Taken together, these observations argue that movements and cognitionare closely intertwined, even during expert decision-making.
Use of brain imaging data to improve prescriptions of psychotropic drugs - Examples of ketamine in depression and antipsychotics in schizophrenia
The use of molecular imaging, particularly PET and SPECT, has significantly transformed the treatment of schizophrenia with antipsychotic drugs since the late 1980s. It has offered insights into the links between drug target engagement, clinical effects, and side effects. A therapeutic window for receptor occupancy is established for antipsychotics, yet there is a divergence of opinions regarding the importance of blood levels, with many downplaying their significance. As a result, the role of therapeutic drug monitoring (TDM) as a personalized therapy tool is often underrated. Since molecular imaging of antipsychotics has focused almost entirely on D2-like dopamine receptors and their potential to control positive symptoms, negative symptoms and cognitive deficits are hardly or not at all investigated. Alternative methods have been introduced, i.e. to investigate the correlation between approximated receptor occupancies from blood levels and cognitive measures. Within the domain of antidepressants, and specifically regarding ketamine's efficacy in depression treatment, there is limited comprehension of the association between plasma concentrations and target engagement. The measurement of AMPA receptors in the human brain has added a new level of comprehension regarding ketamine's antidepressant effects. To ensure precise prescription of psychotropic drugs, it is vital to have a nuanced understanding of how molecular and clinical effects interact. Clinician scientists are assigned with the task of integrating these indispensable pharmacological insights into practice, thereby ensuring a rational and effective approach to the treatment of mental health disorders, signaling a new era of personalized drug therapy mechanisms that promote neuronal plasticity not only under pathological conditions, but also in the healthy aging brain.
How Intermittent Bioenergetic Challenges Enhance Brain and Body Health
Humans and other animals evolved in habitats fraught with a range of environmental challenges to their bodies and brains. Accordingly, cells and organ systems possess adaptive stress-responsive signaling pathways that enable them to not only withstand environmental challenges, but also to prepare for future challenges and function more efficiently. These phylogenetically conserved processes are the foundation of the hormesis principle in which repeated exposures to low to moderate amounts of an environmental challenge improve cellular and organismal fitness. Here I describe cellular and molecular mechanisms by which cells in the brain and body respond to intermittent fasting and exercise in ways that enhance performance and counteract aging and disease processes. Switching back and forth between adaptive stress response (during fasting and exercise) and growth and plasticity (eating, resting, sleeping) modes enhances the performance and resilience of various organ systems. While pharmacological interventions that engage a particular hormetic mechanism are being developed, it seems unlikely that any will prove superior to fasting and exercise.
Development of an open-source femtosecond fiber laser system for multiphoton microscopy
This talk will present a low-cost protocol for fabricating an easily constructed femtosecond (fs) fiber laser system suitable for routine multiphoton microscopy (1060–1080 nm, 1 W average power, 70 fs pulse duration, 30–70 MHz repetition rate). Concepts well-known in the laser physics community essential to proper laser operation, but generally obscure to biophysicists and biomedical engineers, will be clarified. The parts list (~$13K US dollars), the equipment list (~$40K+), and the intellectual investment needed to build the laser will be described. A goal of the presentation will be to engage with the audience to discuss trade-offs associated with a custom-built fs fiber laser versus purchasing a commercial system. I will also touch on my research group’s plans to further develop this custom laser system for multiplexed cancer imaging as well as recent developments in the field that promise even higher performance fs fiber lasers for approximately the same cost and ease of construction.
Cognition in the Wild
What do nonhuman primates know about each other and their social environment, how do they allocate their attention, and what are the functional consequences of social decisions in natural settings? Addressing these questions is crucial to hone in on the co-evolution of cognition, social behaviour and communication, and ultimately the evolution of intelligence in the primate order. I will present results from field experimental and observational studies on free-ranging baboons, which tap into the cognitive abilities of these animals. Baboons are particularly valuable in this context as different species reveal substantial variation in social organization and degree of despotism. Field experiments revealed considerable variation in the allocation of social attention: while the competitive chacma baboons were highly sensitive to deviations from the social order, the highly tolerant Guinea baboons revealed a confirmation bias. This bias may be a result of the high gregariousness of the species, which puts a premium on ignoring social noise. Variation in despotism clearly impacted the use of signals to regulate social interactions. For instance, male-male interactions in chacma baboons mostly comprised dominance displays, while Guinea baboon males evolved elaborate greeting rituals that serve to confirm group membership and test social bonds. Strikingly, the structure of signal repertoires does not differ substantially between different baboon species. In conclusion, the motivational disposition to engage in affiliation or aggressiveness appears to be more malleable during evolution than structural elements of the behavioral repertoire; this insight is crucial for understanding the dynamics of social evolution.
Learning by Analogy in Mathematics
Analogies between old and new concepts are common during classroom instruction. While previous studies of transfer focus on how features of initial learning guide later transfer to new problem solving, less is known about how to best support analogical transfer from previous learning while children are engaged in new learning episodes. Such research may have important implications for teaching and learning in mathematics, which often includes analogies between old and new information. Some existing research promotes supporting learners' explicit connections across old and new information within an analogy. In this talk, I will present evidence that instructors can invite implicit analogical reasoning through warm-up activities designed to activate relevant prior knowledge. Warm-up activities "close the transfer space" between old and new learning without additional direct instruction.
Designing the BEARS (Both Ears) Virtual Reality Training Package to Improve Spatial Hearing in Young People with Bilateral Cochlear Implant
Results: the main areas which were modified based on participatory feedback were the variety of immersive scenarios to cover a range of ages and interests, the number of levels of complexity to ensure small improvements were measured, the feedback and reward schemes to ensure positive reinforcement, and specific provision for participants with balance issues, who had difficulties when using head-mounted displays. The effectiveness of the finalised BEARS suite will be evaluated in a large-scale clinical trial. We have added in additional login options for other members of the family and based on patient feedback we have improved the accompanying reward schemes. Conclusions: Through participatory design we have developed a training package (BEARS) for young people with bilateral cochlear implants. The training games are appropriate for use by the study population and ultimately should lead to patients taking control of their own management and reducing the reliance upon outpatient-based rehabilitation programmes. Virtual reality training provides a more relevant and engaging approach to rehabilitation for young people.
Decision Making and the Brain
In this talk, we will examine human behavior from the perspective of the choices we make every day. We will study the role of the brain in enabling these decisions and discuss some simple computational models of decision making and the neural basis. Towards the end, we will have a short, interactive session to engage in some easy decisions that will help us discover our own biases.
The role of top-down mechanisms in gaze perception
Humans, as a social species, have an increased ability to detect and perceive visual elements involved in social exchanges, such as faces and eyes. The gaze, in particular, conveys information crucial for social interactions and social cognition. Researchers have hypothesized that in order to engage in dynamic face-to-face communication in real time, our brains must quickly and automatically process the direction of another person's gaze. There is evidence that direct gaze improves face encoding and attention capture and that direct gaze is perceived and processed more quickly than averted gaze. These results are summarized as the "direct gaze effect". However, in the recent literature, there is evidence to suggest that the mode of visual information processing modulates the direct gaze effect. In this presentation, I argue that top-down processing, and specifically the relevance of eye features to the task, promotes the early preferential processing of direct versus indirect gaze. On the basis of several recent evidences, I propose that low task relevance of eye features will prevent differences in eye direction processing between gaze directions because its encoding will be superficial. Differential processing of direct and indirect gaze will only occur when the eyes are relevant to the task. To assess the implication of task relevance on the temporality of cognitive processing, we will measure event-related potentials (ERPs) in response to facial stimuli. In this project, instead of typical ERP markers such as P1, N170 or P300, we will measure lateralized ERPs (lERPS) such as lateralized N170 and N2pc, which are markers of early face encoding and attentional deployment respectively. I hypothesize that the relevance of the eye feature task is crucial in the direct gaze effect and propose to revisit previous studies, which had questioned the existence of the direct gaze effect. This claim will be illustrate with different past studies and recent preliminary data of my lab. Overall, I propose a systematic evaluation of the role of top-down processing in early direct gaze perception in order to understand the impact of context on gaze perception and, at a larger scope, on social cognition.
Learning from others, helping others learn: Cognitive foundations of distinctively human social learning
Learning does not occur in isolation. From parent-child interactions to formal classroom environments, humans explore, learn, and communicate in rich, diverse social contexts. Rather than simply observing and copying their conspecifics, humans engage in a range of epistemic practices that actively recruit those around them. What makes human social learning so distinctive, powerful, and smart? In this talk, I will present a series of studies that reveal the remarkably sophisticated inferential abilities that young children show not only in how they learn from others but also in how they help others learn. Children interact with others as learners and as teachers to learn and communicate about the world, about others, and even about the self. The results collectively paint a picture of human social learning that is far more than copying and imitation: It is active, bidirectional, and cooperative. I will end by discussing ongoing work that extends this picture beyond what we typically call “social learning”, with implications for building better machines that learn from and interact with humans.
Learning binds novel inputs into functional synaptic clusters via spinogenesis
Learning is known to induce the formation of new dendritic spines, but despite decades of effort, the functional properties of new spines in vivo remain unknown. Here, using a combination of longitudinal in vivo 2-photon imaging of the glutamate reporter, iGluSnFR, and correlated electron microscopy (CLEM) of dendritic spines on the apical dendrites of L2/3 excitatory neurons in the motor cortex during motor learning, we describe a framework of new spines' formation, survival, and resulting function. Specifically, our data indicate that the potentiation of a subset of clustered, pre-existing spines showing task-related activity in early sessions of learning creates a micro-environment of plasticity within dendrites, wherein multiple filopodia sample the nearby neuropil, form connections with pre-existing boutons connected to allodendritic spines, and are then selected for survival based on co-activity with nearby task-related spines. Thus, the formation and survival of new spines is determined by the functional micro-environment of dendrites. After formation, new spines show preferential co-activation with nearby task-related spines. This synchronous activity is more specific to movements than activation of the individual spines in isolation, and further, is coincident with movements that are more similar to the learned pattern. Thus, new spines functionally engage with their parent clusters to signal the learned movement. Finally, by reconstructing the axons associated with new spines, we found that they synapse with axons previously unrepresented in these dendritic domains, suggesting that the strong local co-activity structure exhibited by new spines is likely not due to axon sharing. Thus, learning involves the binding of new information streams into functional synaptic clusters to subserve the learned behavior.
Black Excellence in Psychology
Ruth Winifred Howard (March 25, 1900 – February 12, 1997) was one of the first African-American women to earn a Ph.D. in Psychology. Her research focused on children with special needs. Join us as we celebrate her birthday anniversary with 5 distinguished Psychologists.
Apathy and Anhedonia in Adult and Adolescent Cannabis Users and Controls Before and During the COVID-19 Pandemic Lockdown
COVID-19 lockdown measures have caused severe disruptions to work and education and prevented people from engaging in many rewarding activities. Cannabis users may be especially vulnerable, having been previously shown to have higher levels of apathy and anhedonia than non-users. In this survey study, we measured apathy and anhedonia, before and after lockdown measures were implemented, in n = 256 adult and n = 200 adolescent cannabis users and n = 170 adult and n = 172 adolescent controls. Scores on the Apathy Evaluation Scale (AES) and Snaith-Hamilton Pleasure Scale (SHAPS) were investigated with mixed-measures ANCOVA, with factors user group, age group, and time, controlling for depression, anxiety, and other drug use. Adolescent cannabis users had significantly higher SHAPS scores before lockdown, indicative of greater anhedonia, compared with adolescent controls (P = .03, η p2 = .013). Contrastingly, adult users had significantly lower scores on both the SHAPS (P < .001, η p2 = .030) and AES (P < .001, η p2 = .048) after lockdown compared with adult controls. Scores on both scales increased during lockdown across groups, and this increase was significantly smaller for cannabis users (AES: P = .001, η p2 = .014; SHAPS: P = .01, η p2 = .008). Exploratory analyses revealed that dependent cannabis users had significantly higher scores overall (AES: P < .001, η p2 = .037; SHAPS: P < .001, η p2 = .029) and a larger increase in scores (AES: P = .04, η p2 =.010; SHAPS: P = .04, η p2 = .010), compared with non-dependent users. Our results suggest that adolescents and adults have differential associations between cannabis use as well as apathy and anhedonia. Within users, dependence may be associated with higher levels of apathy and anhedonia regardless of age and a greater increase in levels during the COVID-19 lockdown.
Metabolic spikes: from rogue electrons to Parkinson's
Conventionally, neurons are thought to be cellular units that process synaptic inputs into synaptic spikes. However, it is well known that neurons can also spike spontaneously and display a rich repertoire of firing properties with no apparent functional relevance e.g. in in vitro cortical slice preparations. In this talk, I will propose a hypothesis according to which intrinsic excitability in neurons may be a survival mechanism to minimize toxic byproducts of the cell’s energy metabolism. In neurons, this toxicity can arise when mitochondrial ATP production stalls due to limited ADP. Under these conditions, electrons deviate from the electron transport chain to produce reactive oxygen species, disrupting many cellular processes and challenging cell survival. To mitigate this, neurons may engage in ADP-producing metabolic spikes. I will explore the validity of this hypothesis using computational models that illustrate the implications of synaptic and metabolic spiking, especially in the context of substantia nigra pars compacta dopaminergic neurons and their degeneration in Parkinson's disease.
Neural circuits for novel choices and for choice speed and accuracy changes in macaques
While most experimental tasks aim at isolating simple cognitive processes to study their neural bases, naturalistic behaviour is often complex and multidimensional. I will present two studies revealing previously uncharacterised neural circuits for decision-making in macaques. This was possible thanks to innovative experimental tasks eliciting sophisticated behaviour, bridging the human and non-human primate research traditions. Firstly, I will describe a specialised medial frontal circuit for novel choice in macaques. Traditionally, monkeys receive extensive training before neural data can be acquired, while a hallmark of human cognition is the ability to act in novel situations. I will show how this medial frontal circuit can combine the values of multiple attributes for each available novel item on-the-fly to enable efficient novel choices. This integration process is associated with a hexagonal symmetry pattern in the BOLD response, consistent with a grid-like representation of the space of all available options. We prove the causal role played by this circuit by showing that focussed transcranial ultrasound neuromodulation impairs optimal choice based on attribute integration and forces the subjects to default to a simpler heuristic decision strategy. Secondly, I will present an ongoing project addressing the neural mechanisms driving behaviour shifts during an evidence accumulation task that requires subjects to trade speed for accuracy. While perceptual decision-making in general has been thoroughly studied, both cognitively and neurally, the reasons why speed and/or accuracy are adjusted, and the associated neural mechanisms, have received little attention. We describe two orthogonal dimensions in which behaviour can vary (traditional speed-accuracy trade-off and efficiency) and we uncover independent neural circuits concerned with changes in strategy and fluctuations in the engagement level. The former involves the frontopolar cortex, while the latter is associated with the insula and a network of subcortical structures including the habenula.
Interpersonal synchrony of body/brain, Solo & Team Flow
Flow is defined as an altered state of consciousness with excessive attention and enormous sense of pleasure, when engaged in a challenging task, first postulated by a psychologist, the late M. Csikszentmihayli. The main focus of this talk will be “Team Flow,” but there were two lines of previous studies in our laboratory as its background. First is inter-body and inter-brain coordination/synchrony between individuals. Considering various rhythmic echoing/synchronization phenomena in animal behavior, it could be regarded as the biological, sub-symbolic and implicit origin of social interactions. The second line of precursor research is on the state of Solo Flow in game playing. We employed attenuation of AEP (Auditory Evoked Potential) to task-irrelevant sound probes as an objective-neural indicator of such a Flow status, and found that; 1) Mutual link between the ACC & the TP is critical, and 2) overall, top-down influence is enhanced while bottom-up causality is attenuated. Having these as the background, I will present our latest study of Team Flow in game playing. We found that; 3) the neural correlates of Team Flow is distinctively different from those of Solo Flow nor of non-flow social, 4) the left medial temporal cortex seems to form an integrative node for Team Flow, receiving input related to Solo Flow state from the right PFC and input related to social state from the right IFC, and 5) Intra-brain (dis)similarity of brain activity well predicts (dis)similarity of skills/cognition as well as affinity for inter-brain coherence.
Neural Codes for Natural Behaviors in Flying Bats
This talk will focus on the importance of using natural behaviors in neuroscience research – the “Natural Neuroscience” approach. I will illustrate this point by describing studies of neural codes for spatial behaviors and social behaviors, in flying bats – using wireless neurophysiology methods that we developed – and will highlight new neuronal representations that we discovered in animals navigating through 3D spaces, or in very large-scale environments, or engaged in social interactions. In particular, I will discuss: (1) A multi-scale neural code for very large environments, which we discovered in bats flying in a 200-meter long tunnel. This new type of neural code is fundamentally different from spatial codes reported in small environments – and we show theoretically that it is superior for representing very large spaces. (2) Rapid modulation of position × distance coding in the hippocampus during collision-avoidance behavior between two flying bats. This result provides a dramatic illustration of the extreme dynamism of the neural code. (3) Local-but-not-global order in 3D grid cells – a surprising experimental finding, which can be explained by a simple physics-inspired model, which successfully describes both 3D and 2D grids. These results strongly argue against many of the classical, geometrically-based models of grid cells. (4) I will also briefly describe new results on the social representation of other individuals in the hippocampus, in a highly social multi-animal setting. The lecture will propose that neuroscience experiments – in bats, rodents, monkeys or humans – should be conducted under evermore naturalistic conditions.
Distance-tuned neurons drive specialized path integration calculations in medial entorhinal cortex
During navigation, animals estimate their position using path integration and landmarks, engaging many brain areas. Whether these areas follow specialized or universal cue integration principles remains incompletely understood. We combine electrophysiology with virtual reality to quantify cue integration across thousands of neurons in three navigation-relevant areas: primary visual cortex (V1), retrosplenial cortex (RSC), and medial entorhinal cortex (MEC). Compared with V1 and RSC, path integration influences position estimates more in MEC, and conflicts between path integration and landmarks trigger remapping more readily. Whereas MEC codes position prospectively, V1 codes position retrospectively, and RSC is intermediate between the two. Lowered visual contrast increases the influence of path integration on position estimates only in MEC. These properties are most pronounced in a population of MEC neurons, overlapping with grid cells, tuned to distance run in darkness. These results demonstrate the specialized role that path integration plays in MEC compared with other navigation-relevant cortical areas.
Playing StarCraft and saving the world using multi-agent reinforcement learning!
This is my C-14 Impaler gauss rifle! There are many like it, but this one is mine!" - A terran marine If you have never heard of a terran marine before, then you have probably missed out on playing the very engaging and entertaining strategy computer game, StarCraft. However, don’t despair, because what we have in store might be even more exciting! In this interactive session, we will take you through, step-by-step, on how to train a team of terran marines to defeat a team of marines controlled by the built-in game AI in StarCraft II. How will we achieve this? Using multi-agent reinforcement learning (MARL). MARL is a useful framework for building distributed intelligent systems. In MARL, multiple agents are trained to act as individual decision-makers of some larger system, while learning to work as a team. We will show you how to use Mava (https://github.com/instadeepai/Mava), a newly released research framework for MARL to build a multi-agent learning system for StarCraft II. We will provide the necessary guidance, tools and background to understand the key concepts behind MARL, how to use Mava building blocks to build systems and how to train a system from scratch. We will conclude the session by briefly sharing various exciting real-world application areas for MARL at InstaDeep, such as large-scale autonomous train navigation and circuit board routing. These are problems that become exponentially more difficult to solve as they scale. Finally, we will argue that many of humanity’s most important practical problems are reminiscent of the ones just described. These include, for example, the need for sustainable management of distributed resources under the pressures of climate change, or efficient inventory control and supply routing in critical distribution networks, or robotic teams for rescue missions and exploration. We believe MARL has enormous potential to be applied in these areas and we hope to inspire you to get excited and interested in MARL and perhaps one day contribute to the field!
CrossTalk: Conversations at the Intersection of Science and Art
Anjan Chatterjee is a Professor of Neurology, Psychology, and Architecture and the founding Director of the Penn Center for Neuroaesthetics. His research explores the field of neuroaesthetics: how our brain experiences and responds to art. Lucas Kelly is a renowned visual artist, with work featured across several solo and group exhibitions, most notably in the survey of abstract painting “The Painted World” at PS1 Museum of Modern Art. As the inaugural Artist in Residence for the Penn Center for Neuroaesthetics, Lucas has collaborated with Anjan on a forthcoming exhibition, considering the emotions involved in aesthetic engagement informed by research. This event will feature a moderated conversation between Anjan and Lucas, discussing topics at the intersection of neuroscience and experience of visual art.
Understanding the Assessment of Spatial Neglect and its Treatment Using Prism Adaptation Training
Spatial neglect is a syndrome that is most frequently associated with damage to the right hemisphere, although damage to the left hemisphere can also result in signs of spatial neglect. It is characterised by absent or deficient awareness of the contralesional side of space. The screening and diagnosis of spatial neglect lacks a universal gold standard, but is usually achieved by using various modes of assessment. Spatial neglect is also difficult to treat, although prism adaptation training (PAT) has in the past reportedly showed some promise. This seminar will include highlights from a series of studies designed to identify knowledge gaps, and will suggest ways in which these can be bridged. The first study was conducted to identify and quantify clinicians’ use of assessment tools for spatial neglect, finding that several different tools are in use, but that there is an emerging consensus and appetite for harmonisation. The second study included PAT, and sought to uncover whether PAT can improve engagement in recommended therapy in order to improve the outcomes of stroke survivors with spatial neglect. The final study, a systematic review and meta-analysis, sought to investigate the scientific efficacy (rather than clinical effectiveness) of PAT, identifying several knowledge gaps in the existing literature and a need for a new approach in the study of PAT in the clinical setting.
Communicating (Neuro)Science
In recent years, communicating one’s research to audiences outside of academia has grown in importance and time commitment for many researchers. Science Slams or University Open Days reliably draw large crowds, and the potential of social media to amplify any message has made it possible to reach interested recipients without the traditional press as a middleman. In this presentation, I will provide insights into science communication from my perspective as a neuroscience researcher, who enjoys spreading the word about how amazing insect brains are. We will have a look at the What?, Why? and How? of science communication. What do we generally mean by the term, and what forms can it take? Why should – or must – we engage in it? And how can we best achieve our aims with it? I will provide an overview of the current communication landscape, some food for (critical) thought, and many practical tips that help me when preparing to share my science with a wider audience.
A reward-learning framework of knowledge acquisition
Recent years have seen a considerable surge of research on interest-based engagement, examining how and why people are engaged in activities without relying on extrinsic rewards. However, the field of inquiry has been somewhat segregated into three different research traditions which have been developed relatively independently --- research on curiosity, interest, and trait curiosity/interest. The current talk sets out an integrative perspective; the reward-learning framework of knowledge acquisition. This conceptual framework takes on the basic premise of existing reward-learning models of information seeking: that knowledge acquisition serves as an inherent reward, which reinforces people’s information-seeking behavior through a reward-learning process. However, the framework reveals how the knowledge-acquisition process is sustained and boosted over a long period of time in real-life settings, allowing us to integrate the different research traditions within reward-learning models. The framework also characterizes the knowledge-acquisition process with four distinct features that are not present in the reward-learning process with extrinsic rewards --- (1) cumulativeness, (2) selectivity, (3) vulnerability, and (4) under-appreciation. The talk describes some evidence from our lab supporting these claims.
A reward-learning framework of knowledge acquisition: How we can integrate the concepts of curiosity, interest, and intrinsic-extrinsic rewards
Recent years have seen a considerable surge of research on interest-based engagement, examining how and why people are engaged in activities without relying on extrinsic rewards. However, the field of inquiry has been somewhat segregated into three different research traditions which have been developed relatively independently -- research on curiosity, interest, and trait curiosity/interest. The current talk sets out an integrative perspective; the reward-learning framework of knowledge acquisition. This conceptual framework takes on the basic premise of existing reward-learning models of information seeking: that knowledge acquisition serves as an inherent reward, which reinforces people’s information-seeking behavior through a reward-learning process. However, the framework reveals how the knowledge-acquisition process is sustained and boosted over a long period of time in real-life settings, allowing us to integrate the different research traditions within reward-learning models. The framework also characterizes the knowledge-acquisition process with four distinct features that are not present in the reward-learning process with extrinsic rewards -- (1) cumulativeness, (2) selectivity, (3) vulnerability, and (4) under-appreciation. The talk describes some evidence from our lab supporting these claims.
Causal coupling between neural activity, metabolism, and behavior across the Drosophila brain
Coordinated activity across networks of neurons is a hallmark of both resting and active behavioral states in many species, including worms, flies, fish, mice and humans. These global patterns alter energy metabolism in the brain over seconds to hours, making oxygen consumption and glucose uptake widely used proxies of neural activity. However, whether changes in neural activity are causally related to changes in metabolic flux in intact circuits on the sub-second timescales associated with behavior, is unclear. Moreover, it is unclear whether differences between rest and action are associated with spatiotemporally structured changes in neuronal energy metabolism at the subcellular level. My work combines two-photon microscopy across the fruit fly brain with sensors that allow simultaneous measurements of neural activity and metabolic flux, across both resting and active behavioral states. It demonstrates that neural activity drives changes in metabolic flux, creating a tight coupling between these signals that can be measured across large-scale brain networks. Further, using local optogenetic perturbation, I show that even transient increases in neural activity result in rapid and persistent increases in cytosolic ATP, suggesting that neuronal metabolism predictively allocates resources to meet the energy demands of future neural activity. Finally, these studies reveal that the initiation of even minimal behavioral movements causes large-scale changes in the pattern of neural activity and energy metabolism, revealing unexpectedly widespread engagement of the central brain.
Regenerative Neuroimmunology - a stem cell perspective
There are currently no approved therapies to slow down the accumulation of neurological disability that occurs independently of relapses in multiple sclerosis (MS). International agencies are engaging to expedite the development of novel strategies capable of modifying disease progression, abrogating persistent CNS inflammation, and support degenerating axons in people with progressive MS. Understanding why regeneration fails in the progressive MS brain and developing new regenerative approaches is a key priority for the Pluchino Lab. In particular, we aim to elucidate how the immune system, in particular its cells called myeloid cells, affects brain structure and function under normal healthy conditions and in disease. Our objective is to find how myeloid cells communicate with the central nervous system and affect tissue healing and functional recovery by stimulating mechanisms of brain plasticity mechanisms such as the generation of new nerve cells and the reduction of scar formation. Applying combination of state-of-the-art omic technologies, and molecular approaches to study murine and human disease models of inflammation and neurodegeneration, we aim to develop experimental molecular medicines, including those with stem cells and gene therapy vectors, which slow down the accumulation of irreversible disabilities and improve functional recovery after progressive multiple sclerosis, stroke and traumatic injuries. By understanding the mechanisms of intercellular (neuro-immune) signalling, diseases of the brain and spinal cord may be treated more effectively, and significant neuroprotection may be achieved with new tailored molecular therapeutics.
Smart perception?: Gestalt grouping, perceptual averaging, and memory capacity
It seems we see the world in full detail. However, the eye is not a camera nor is the brain a computer. Incredible metabolic constraints render us unable to encode more than a fraction of information available in each glance. Instead, our illusion of stable and complete perception is accomplished by parsimonious representation relying on natural order inherent in the surrounding environment. I will begin by discussing previous behavioral work from our lab demonstrating one such strategy by which the visual system represents average properties of Gestalt-grouped sets of individual objects, warping individual object representations toward the Gestalt-defined mean. I will then discuss on-going work using a behavioral index of averaging Gestalt-grouped information established in our previous work in conjunction with an ERP-index of VSTM capacity (the CDA) to measure whether the Gestalt-grouping and perceptual averaging strategy acts to boost memory capacity above the classic “four-item” limit. Finally, I will outline our pre-registered study to determine whether this perceptual strategy is indeed engaged in a “smart” manner under normal circumstances, or compromises fidelity for capacity by perceptually-averaging in trials with only four items that could otherwise be individually represented.
Workshop: Spatial Brain Dynamics
Traditionally, the term dynamics means changes in a system evolving over time. However, in the brain action potentials propagate along axons to induce postsynaptic currents with different delays at many sites simultaneously. This fundamental computational mechanism evolves spatially to engage the neuron populations involved in brain functions. To identify and understand the spatial processing in brains, this workshop will focus on the spatial principles of brain dynamics that determine how action potentials and membrane currents propagate in the networks of neurons that brains are made of. We will focus on non-artificial dynamics, which excludes in vitro dynamics, interference, electrical and optogenetic stimulations of brains in vivo. Recent non-artificial studies of spatial brain dynamics can actually explain how sensory, motor and internal brain functions evolve. The purpose of this workshop is to discuss these recent results and identify common principles of spatial brain dynamics.
Networks for multi-sensory attention and working memory
Converging evidence from fMRI and EEG shows that audtiory spatial attention engages the same fronto-parietal network associated with visuo-spatial attention. This network is distinct from an auditory-biased processing network that includes other frontal regions; this second network is can be recruited when observers extract rhythmic information from visual inputs. We recently used a dual-task paradigm to examine whether this "division of labor" between a visuo-spatial network and an auditory-rhythmic network can be observed in a working memory paradigm. We varied the sensory modality (visual vs. auditory) and information domain (spatial or rhythmic) that observers had to store in working memory, while also performing an intervening task. Behavior, pupilometry, and EEG results show a complex interaction across the working memory and intervening tasks, consistent with two cognitive control networks managing auditory and visual inputs based on the kind of information being processed.
Workshop: Spatial Brain Dynamics
Traditionally, the term dynamics means changes in a system evolving over time. However, in the brain action potentials propagate along axons to induce postsynaptic currents with different delays at many sites simultaneously. This fundamental computational mechanism evolves spatially to engage the neuron populations involved in brain functions. To identify and understand the spatial processing in brains, this workshop will focus on the spatial principles of brain dynamics that determine how action potentials and membrane currents propagate in the networks of neurons that brains are made of. We will focus on non-artificial dynamics, which excludes in vitro dynamics, interference, electrical and optogenetic stimulations of brains in vivo. Recent non-artificial studies of spatial brain dynamics can actually explain how sensory, motor and internal brain functions evolve. The purpose of this workshop is to discuss these recent results and identify common principles of spatial brain dynamics.
Workshop: Spatial Brain Dynamics
Traditionally, the term dynamics means changes in a system evolving over time. However, in the brain action potentials propagate along axons to induce postsynaptic currents with different delays at many sites simultaneously. This fundamental computational mechanism evolves spatially to engage the neuron populations involved in brain functions. To identify and understand the spatial processing in brains, this workshop will focus on the spatial principles of brain dynamics that determine how action potentials and membrane currents propagate in the networks of neurons that brains are made of. We will focus on non-artificial dynamics, which excludes in vitro dynamics, interference, electrical and optogenetic stimulations of brains in vivo. Recent non-artificial studies of spatial brain dynamics can actually explain how sensory, motor and internal brain functions evolve. The purpose of this workshop is to discuss these recent results and identify common principles of spatial brain dynamics.
Structure-mapping in Human Learning
Across species, humans are uniquely able to acquire deep relational systems of the kind needed for mathematics, science, and human language. Analogical comparison processes are a major contributor to this ability. Analogical comparison engages a structure-mapping process (Gentner, 1983) that fosters learning in at least three ways: first, it highlights common relational systems and thereby promotes abstraction; second, it promotes inferences from known situations to less familiar situations; and, third, it reveals potentially important differences between examples. In short, structure-mapping is a domain-general learning process by which abstract, portable knowledge can arise from experience. It is operative from early infancy on, and is critical to the rapid learning we see in human children. Although structure-mapping processes are present pre-linguistically, their scope is greatly amplified by language. Analogical processes are instrumental in learning relational language, and the reverse is also true: relational language acts to preserve relational abstractions and render them accessible for future learning and reasoning. Although structure-mapping processes are present pre-linguistically, their scope is greatly amplified by language. Analogical processes are instrumental in learning relational language, and the reverse is also true: relational language acts to preserve relational abstractions and render them accessible for future learning and reasoning.
Understanding sensorimotor control at global and local scales
The brain is remarkably flexible, and appears to instantly reconfigure its processing depending on what’s needed to solve a task at hand: fMRI studies indicate that distal brain areas appear to fluidly couple and decouple with one another depending on behavioral context. But the structural architecture of the brain is comprised of long-range axonal projections that are relatively fixed by adulthood. How does the global dynamism evident in fMRI recordings manifest at a cellular level? To bridge the gap between the activity of single neurons and cortex-wide networks, we correlated electrophysiological recordings of individual neurons in primary visual (V1) and retrosplenial (RSP) associational cortex with activity across dorsal cortex, recorded simultaneously using widefield calcium imaging. We found that individual neurons in both cortical areas independently engaged in different distributed cortical networks depending on the animal’s behavioral state, suggesting that locomotion puts cortex into a more sensory driven mode relevant for navigation.
The shared predictive roots of motor control and beat-based timing
fMRI results have shown that the supplementary motor area (SMA) and the basal ganglia, most often discussed in their roles in generating action, are engaged by beat-based timing even in the absence of movement. Some have argued that the motor system is “recruited” by beat-based timing tasks due to the presence of motor-like timescales, but a deeper understanding of the roles of these motor structures is lacking. Reviewing a body of motor neurophysiology literature and drawing on the “active inference” framework, I argue that we can see the motor and timing functions of these brain areas as examples of dynamic sub-second prediction informed by sensory event timing. I hypothesize that in both cases, sub-second dynamics in SMA predict the progress of a temporal process outside the brain, and direct pathway activation in basal ganglia selects temporal and sensory predictions for the upcoming interval -- the only difference is that in motor processes, these predictions are made manifest through motor effectors. If we can unify our understanding of beat-based timing and motor control, we can draw on the substantial motor neuroscience literature to make conceptual leaps forward in the study of predictive timing and musical rhythm.
Mice alternate between discrete strategies during perceptual decision-making
Classical models of perceptual decision-making assume that animals use a single, consistent strategy to integrate sensory evidence and form decisions during an experiment. In this talk, I aim to convince you that this common view is incorrect. I will show results from applying a latent variable framework, the “GLM-HMM”, to hundreds of thousands of trials of mouse choice data. Our analysis reveals that mice don’t lapse. Instead, mice switch back and forth between engaged and disengaged behavior within a single session, and each mode of behavior lasts tens to hundreds of trials.
Ways to think about the brain
Historically, research on the brain has been working its way in from the outside world, hoping that such systematic exploration will take us some day to the middle and on through the middle to the output. Ever since the time of Aristotle, philosophers and scientists have assumed that the brain (or, more precisely, the mind) is initially a blank slate filled up gradually with experience in an outside-in manner. An alternative, brain-centric view, the one I am promoting, is that self-organized brain networks induce a vast repertoire of preformed neuronal patterns. While interacting with the world, some of these initially ‘nonsensical’ patterns acquire behavioral significance or meaning. Thus, experience is primarily a process of matching preexisting neuronal dynamics to events in the world. I suggest that perpetually active, internal dynamic is the source of cognition, a neuronal operation disengaged from immediate senses.
Social transmission of maternal behavior
Maternal care is profoundly important for mammalian survival, and in many species requires the contribution of non-biological parents, or alloparents. In the absence of partum and post-partum related hormonal changes, alloparents acquire maternal skills from experience, by yet unknown mechanisms. One critical molecular signal for maternal behavior is oxytocin, a hormone centrally released by hypothalamic paraventricular nucleus (PVN). Do experiences that induce maternal behavior act by engaging PVN oxytocin neurons? To answer this, we used virgin female mice, animals that in the wild live in colonies with experienced mothers and their pups, helping with pup care. We replicated this setup in the lab, and we continuously monitored homecage behavior of virgin mice co-housed for days with a mother and litter, synchronized with recordings from virgin PVN cells, including from oxytocin neurons. Mothers engaged virgins in maternal care in part by shepherding virgins towards the nest, ensuring their proximity to pups, and in part by self-generating pup retrieval episodes, demonstrating maternal behavior to virgins. The frequency of shepherding and of dam retrievals correlates with virgin's subsequent ability to retrieve pups, a quintessential mouse maternal skill. These social interactions activated virgin PVN and gated behaviorally-relevant cortical plasticity for pup vocalizations. Thus, rodents can acquire maternal behavior by social transmission, and our results describe a mechanism for adapting brains of adult caregivers to infant needs via endogenous oxytocin.
Reward processing in psychosis: adding meanings to the findings
Much of our daily behavior is driven by rewards. The ability to learn to pursue rewarding experiences is, in fact, an essential metric of mental health. Conversely, reduced capacity to engage in adaptive goal-oriented behavior is the hallmark of apathy, and present in the psychotic disorder. The search for its underlying mechanisms has resulted in findings of profound impairments in learning from rewards and the associated blunted activation in key reward areas of the brain of patients with psychosis. An emerging research field has been relying on digital phenotyping tools and ecological momentary assessments (EMA) that map patients’ current mood, behavior and context in the flow of their daily lives. Using these tools, we have started to see a different picture of apathy, one that is exquisitely driven by the environment. For one, reward sensitivity appears to be blunted by stressors, and exposure to undue chronic stress in the daily life may result in apathy in those predisposed to psychosis. Secondly, even patients with psychosis who exhibit clinically elevated levels of apathy are perfectly capable of seeking out and enjoying social interactions in their daily life, if their environment allows them to do so. The use of digital phenotyping tools in combination with neuroimaging of apathy not only allows us to add meanings to the neurobiological findings, but could also help design rational interventions.
Becoming Human: A Theory of Ontogeny
Humans are biologically adapted for cultural life in ways that other primates are not. Humans have unique motivations and cognitive skills for sharing emotions, experience, and collaborative actions (shared intentionality). These motivations and skills first emerge in human ontogeny at around one year of age, as infants begin to participate with other persons in various kinds of collaborative and joint attentional activities, including linguistic communication. Our nearest primate relatives understand important aspects of intentional action - especially in competitive situations - but they do not seem to have the motivations and cognitive skills necessary to engage in activities involving collaboration, shared intentionality, and, in general, things cultural.
Time is of the essence: active sensing in natural vision reveals novel mechanisms of perception
n natural vision, active vision refers to the changes in visual input resulting from self-initiated eye movements. In this talk, I will present studies that show that the stimulus-related activity during active vision differs substantially from that occurring during classical flashed-stimuli paradigms. Our results uncover novel and efficient mechanisms that improve visual perception. In a general way, the nervous system appears to engage in sensory modulation mechanisms, precisely timed to self-initiated stimulus changes, thus coordinating neural activity across different cortical areas and serving as a general mechanism for the global coordination of visual perception.
Development of the social brain in adolescence and effects of social distancing
Adolescence is a period of life characterised by heightened sensitivity to social stimuli, an increased need for peer interaction and peer acceptance, and development of the social brain. Lockdown and social distancing measures intended to mitigate the spread of COVID-19 are reducing the opportunity to engage in face-to-face social interaction with peers. The consequences of social distancing on human social brain and social cognitive development are unknown, but animal research has shown that social deprivation and isolation have unique effects on brain and behaviour in adolescence compared with other stages of life. It is possible that social distancing might have a disproportionate effect on an age group for whom peer interaction is a vital aspect of development.
Virus-like intercellular communication in the nervous system
The neuronal gene Arc is essential for long-lasting information storage in the mammalian brain and mediates various forms of synaptic plasticity. We recently discovered that Arc self-assembles into virus-like capsids that encapsulate RNA. Endogenous Arc protein is released from neurons in extracellular vesicles that mediate the transfer of Arc mRNA into new target cells. Evolutionary analysis indicates that Arc is derived from a vertebrate lineage of Ty3/gypsy retrotransposons, which are also ancestral to retroviruses such as HIV. These findings suggest that Gag retroelements have been repurposed during evolution to mediate intercellular communication in the nervous system that may underlie cognition and memory.
A sense of time in human evolution
What psychological mechanisms do primates use to engage in self-control, and what is the ultimate function of these skills? I will argue that a suite of decision-making capacities, including choices about the timing of benefits, evolved in the context of foraging behaviors and vary with ecological complexity across species. Then, I will examine how these foraging capacities can be generalized to solve novel problems posing temporal costs that are important for humans, such as cooking food, and can therefore underpin evolutionary transitions in behavior. Finally, I will present work testing the hypothesis that a limited future time horizon constrains the expression of other complex abilities in nonhumans, explaining the emergence of human-unique forms of social cognition and behavior.
Analogies, Games and the Learning of Mathematics
Research on analogical processing and reasoning has provided strong evidence that the use of adequate educational analogies has strong and positive effects on the learning of mathematics. In this talk I will show some experimental results suggesting that analogies based on spatial representations might be particularly effective to improve mathematics learning. Since fostering mathematics learning also involves addressing psychosocial factors such as the development of mathematical anxiety, providing social incentives to learn, and fostering engagement and motivation, I will argue that one area to explore with great potential to improve math learning is applying analogical research in the development of learning games aimed to improve math learning. Finally, I will show some early prototypes of an educational project devoted to developing games designed to foster the learning of early mathematics in kindergarten children.
The geometry of abstraction in hippocampus and pre-frontal cortex
The curse of dimensionality plagues models of reinforcement learning and decision-making. The process of abstraction solves this by constructing abstract variables describing features shared by different specific instances, reducing dimensionality and enabling generalization in novel situations. Here we characterized neural representations in monkeys performing a task where a hidden variable described the temporal statistics of stimulus-response-outcome mappings. Abstraction was defined operationally using the generalization performance of neural decoders across task conditions not used for training. This type of generalization requires a particular geometric format of neural representations. Neural ensembles in dorsolateral pre-frontal cortex, anterior cingulate cortex and hippocampus, and in simulated neural networks, simultaneously represented multiple hidden and explicit variables in a format reflecting abstraction. Task events engaging cognitive operations modulated this format. These findings elucidate how the brain and artificial systems represent abstract variables, variables critical for generalization that in turn confers cognitive flexibility.
Motor BMIs for probing sensorimotor control and parsing distributed learning
Brain-machine interfaces (BMIs) change how the brain sends and receives information from the environment, opening new ways to probe brain function. For instance, motor BMIs allow us to precisely define and manipulate the sensorimotor loop which has enabled new insights into motor control and learning. In this talk, I’ll first present an example study where sensory-motor loop manipulations in BMI allowed us to probe feed-forward and feedback control mechanisms in ways that are not possible in the natural motor system. This study shed light on sensorimotor processing, and in turn led to state-of-the-art neural interface performance. I’ll then survey recent work that highlights the likelihood that BMIs, much like natural motor learning, engages multiple distributed learning mechanisms that can be carefully interrogated with BMI.
Motor Cortical Control of Vocal Interactions in a Neotropical Singing Mouse
Using sounds for social interactions is common across many taxa. Humans engaged in conversation, for example, take rapid turns to go back and forth. This ability to act upon sensory information to generate a desired motor output is a fundamental feature of animal behavior. How the brain enables such flexible sensorimotor transformations, for example during vocal interactions, is a central question in neuroscience. Seeking a rodent model to fill this niche, we are investigating neural mechanisms of vocal interaction in Alston’s singing mouse (Scotinomys teguina) – a neotropical rodent native to the cloud forests of Central America. We discovered sub-second temporal coordination of advertisement songs (counter-singing) between males of this species – a behavior that requires the rapid modification of motor outputs in response to auditory cues. We leveraged this natural behavior to probe the neural mechanisms that generate and allow fast and flexible vocal communication. Using causal manipulations, we recently showed that an orofacial motor cortical area (OMC) in this rodent is required for vocal interactions (Okobi*, Banerjee* et. al, 2019). Subsequently, in electrophysiological recordings, I find neurons in OMC that track initiation, termination and relative timing of songs. Interestingly, persistent neural dynamics during song progression stretches or compresses on every trial to match the total song duration (Banerjee et al, in preparation). These results demonstrate robust cortical control of vocal timing in a rodent and upends the current dogma that motor cortical control of vocal output is evolutionarily restricted to the primate lineage.
Panorama de tecnologías abiertas para ciencia y educación en América Latina
Open science hardware (OSH) as a concept usually refers to artifacts, but also to a practice, a discipline and a collective of people pushing for open access to the design of science tools. Since 2016, the Global Open Science Hardware (GOSH) movement gathers actors from academia, education, the private sector and civic organisations to advocate for OSH to be ubiquitous by 2025. In Latin America, GOSH advocates have fundraised and gathered around the development of annual "residencies" for building hardware for science and education. The community is currently defining its regional strategy and identifying other regional actors working on science and technology democratization. In this presentation I will give an overview of the open hardware movement for science, with a focus on the activities and strategy of the Latin American chapter and concrete ways to engage.
Neuroscience tools for the 99%: On the low-fi development of high-tech lab gear for hands-on neuroscience labs and exploratory research
The public has a fascination with the brain, but little attention is given to neuroscience education prior to graduate studies in brain-related fields. One reason may be the lack of low cost and engaging teaching materials. To address this, we have developed a suite of open-source tools which are appropriate for amateurs and for use in high school, undergraduate, and graduate level educational and research programs. This lecture will provide an overview of our mission to re-engineer research-grade lab equipment using first principles and will highlight basic principles of neuroscience in a "DIY" fashion: neurophysiology, functional electrical stimulation, micro-stimulation effect on animal behavior, neuropharmacology, even neuroprosthesis and optogenetics! Finally, with faculty academic positions becoming a scarce resource, I will discuss an alternative academic career path: entrepreneurship. It is possible to be an academic, do research, publish papers, present at conferences and train students all outside the traditional university setting. I will close by discussing my career path from graduate student to PI/CEO of a startup neuroscience company.
Brain-Body Music Interfaces for Creativity, Education and Well-being
The Georgia Tech Brain Music Lab is a community gathered around a unique facility combining EEG and other physiological measurement techniques with new music technologies. Their mission is to engage in research and creative practice that brings health and well-being. This talk will present an overview of the activities at the Brain Music Lab, including sonification of physiological signals, acoustic design for health and well-being, therapeutic applications of musical stimulation, and brain-body music performance.
Food Mind Control: Regulation of Sensory Behaviors by Gut-Brain Signaling
How does the presence or absence of food shape and prioritize behavioral decisions? When is food more than just food? As in other animals, prolonged food deprivation dramatically alters sensory behaviors in C. elegans. For instance, it has been known since the mid-1970s that hungry worms no longer respond to temperature changes in their environment, but the underlying mechanisms have been unclear. I will describe unpublished work showing that insulin signaling from the gut regulates thermosensory behaviors as a function of feeding state by engaging a modulatory sensorimotor circuit that gates the output of the core thermosensory network. C. elegans is associated with, and consumes, diverse bacteria in the wild. I will also discuss a recent story in which we find that in addition to providing nutrition, a bacterial strain in the worm gut alters the hosts’ olfactory behavior and drives food choice decisions by producing a neurotransmitter that targets the hosts’ sensory neurons. These results add to our growing body of knowledge of how signaling from the gut modulates peripheral and central neuron properties and drives sensory behavioral plasticity.
How sleep remodels the brain
50 years ago it was found that sleep somehow made memories better and more permanent, but neither sleep nor memory researchers knew enough about sleep and memory to devise robust, effective tests. Today the fields of sleep and memory have grown and what is now understood is astounding. Still, great mysteries remain. What is the functional difference between the subtly different slow oscillation vs the slow wave of sleep and do they really have opposite memory consolidation effects? How do short spindles (e.g. <0.5 s as in schizophrenia) differ in function from longer ones and are longer spindles key to integrating new memories with old? Is the nesting of slow oscillations together with sleep spindles and hippocampal ripples necessary? What happens if all else is fine but the neurochemical environment is altered? Does sleep become maladaptive and “cement” memories into the hippocampal warehouse where they are assembled, together with all of their emotional baggage? Does maladaptive sleep underlie post-traumatic stress disorder and other stress-related disorders? How do we optimize sleep characteristics for top emotional and cognitive function? State of the art findings and current hypotheses will be presented.
Neural coding in the auditory cortex - "Emergent Scientists Seminar Series
Dr Jennifer Lawlor Title: Tracking changes in complex auditory scenes along the cortical pathway Complex acoustic environments, such as a busy street, are characterised by their everchanging dynamics. Despite their complexity, listeners can readily tease apart relevant changes from irrelevant variations. This requires continuously tracking the appropriate sensory evidence while discarding noisy acoustic variations. Despite the apparent simplicity of this perceptual phenomenon, the neural basis of the extraction of relevant information in complex continuous streams for goal-directed behavior is currently not well understood. As a minimalistic model for change detection in complex auditory environments, we designed broad-range tone clouds whose first-order statistics change at a random time. Subjects (humans or ferrets) were trained to detect these changes.They were faced with the dual-task of estimating the baseline statistics and detecting a potential change in those statistics at any moment. To characterize the extraction and encoding of relevant sensory information along the cortical hierarchy, we first recorded the brain electrical activity of human subjects engaged in this task using electroencephalography. Human performance and reaction times improved with longer pre-change exposure, consistent with improved estimation of baseline statistics. Change-locked and decision-related EEG responses were found in a centro-parietal scalp location, whose slope depended on change size, consistent with sensory evidence accumulation. To further this investigation, we performed a series of electrophysiological recordings in the primary auditory cortex (A1), secondary auditory cortex (PEG) and frontal cortex (FC) of the fully trained behaving ferret. A1 neurons exhibited strong onset responses and change-related discharges specific to neuronal tuning. PEG population showed reduced onset-related responses, but more categorical change-related modulations. Finally, a subset of FC neurons (dlPFC/premotor) presented a generalized response to all change-related events only during behavior. We show using a Generalized Linear Model (GLM) that the same subpopulation in FC encodes sensory and decision signals, suggesting that FC neurons could operate conversion of sensory evidence to perceptual decision. All together, these area-specific responses suggest a behavior-dependent mechanism of sensory extraction and generalization of task-relevant event. Aleksandar Ivanov Title: How does the auditory system adapt to different environments: A song of echoes and adaptation
The geometry of abstraction in artificial and biological neural networks
The curse of dimensionality plagues models of reinforcement learning and decision-making. The process of abstraction solves this by constructing abstract variables describing features shared by different specific instances, reducing dimensionality and enabling generalization in novel situations. We characterized neural representations in monkeys performing a task where a hidden variable described the temporal statistics of stimulus-response-outcome mappings. Abstraction was defined operationally using the generalization performance of neural decoders across task conditions not used for training. This type of generalization requires a particular geometric format of neural representations. Neural ensembles in dorsolateral pre-frontal cortex, anterior cingulate cortex and hippocampus, and in simulated neural networks, simultaneously represented multiple hidden and explicit variables in a format reflecting abstraction. Task events engaging cognitive operations modulated this format. These findings elucidate how the brain and artificial systems represent abstract variables, variables critical for generalization that in turn confers cognitive flexibility.
Accurate Engagement of the Drosophila Central-Complex Compass During Head-Fixed Path-Constrained Navigation
COSYNE 2022
Engagement of the respiratory CPG for songbird vocalizations
COSYNE 2022
Flexible decision-making engages generalizable spiraling dynamical motifs in prefrontal cortex
COSYNE 2025
Sparse neural engagement in connectome-based reservoir computing networks
COSYNE 2025
Barrel-septa response identity in the somatosensory cortex of mice is regulated by progressive engagement of SST+ interneurons via ELFN1
FENS Forum 2024
Behavioural hypersensitivity to CO2 is associated with increased engagement of the insula in subjects with high trait anxiety
FENS Forum 2024
Developmental and temporal dynamics in cognitive control engagement during explicit learning
FENS Forum 2024
Engagement of basal amygdala-nucleus accumbens neurons in the processing of rewarding or aversive social stimuli
FENS Forum 2024
Engaging the delayed non-match to position task in rats as a test of inflammatory-induced cognitive impairment and model to assess pro-cognitive anti-inflammatory agents
FENS Forum 2024
Global brain c-Fos mapping reveals differences in brain network engagement during navigation using different visual cue classes
FENS Forum 2024
Improving perceptual learning efficiency with brief memory reactivations engages distinct neural mechanisms
FENS Forum 2024
Individual differences in spatial working memory strategies differentially reflected in the engagement of control and default brain networks
FENS Forum 2024
Interactions between sensory and motor systems: Corticocerebellar circuits and task engagement
FENS Forum 2024
Neonatal white matter microstructure predicts attention disengagement from fearful faces at 8 months
FENS Forum 2024
Nigroincertal activation engages lateral habenula and periaqueductal gray
FENS Forum 2024
The parabrachial nucleus recruits ventral tegmental area to convey negative emotions and disengage instrumental food seeking
FENS Forum 2024
Predictive processing of tactile sensory information in mice engaged in a locomotion task
FENS Forum 2024
Pupil dynamics preceding switches in task engagement
FENS Forum 2024