Locomotion
locomotion
Dr. Simon Danner
A Postdoctoral Fellow/Research Associate position is available in Dr. Simon Danner’s laboratory at the Department of Neurobiology and Anatomy, Drexel University College of Medicine to study the spinal locomotor circuitry and its interactions with the musculoskeletal system and afferent feedback. The qualified postdoc will work on several collaborative, interdisciplinary, NIH-funded projects to uncover the connectivity and function of somatosensory afferents and various genetically or anatomically identified interneurons. The studies involve the development of computer models of mouse, rat, and cat biomechanics connected with models of the spinal locomotor circuitry. The successful candidate will closely collaborate with other computational and experimental neuroscientists: they will use experimental data to implement and refine the model, and use the model to derive predictions that will then be tested experimentally by our collaborators. Essential Functions: • Work with existing and develop new biomechanical models of the mouse, rat and cat • Develop neural network models of the spinal locomotor circuits • Integrate the neural network and biomechanical models to simulate locomotor behavior • Use numerical optimization to optimize the neuromechanical models • Apply machine learning/reinforcement learning • Use the models to derive experimentally testable predictions • Closely collaborate with experimental neuroscientists • Analyze kinematic and electrophysiological data • Write and submit research manuscripts • Present novel findings at national and international conferences The qualified candidate will benefit from joining a well-funded research group that works in a dynamic, collaborative and interdisciplinary environment. The highly collegial Danner lab is a member of the Neuroengineering Program, the Theoretical & Computational Neuroscience group, and the Spinal Cord Research Center within Drexel University College of Medicine’s Department of Neurobiology and Anatomy (http://drexel.edu/medicine/About/Departments/Neurobiology-Anatomy/) in Philadelphia, PA. The Department provides an outstanding scientific environment for multidisciplinary training. Interactions and collaborations between labs and between other departments are encouraged.
Rune W. Berg
The lab of Rune W. Berg is looking for a highly motivated and dynamic researcher for a 3-year position to start January 1st, 2024. The topic is the neuroscience of motor control with a focus on locomotion and spinal circuitry and connections with the brain. The person will be performing the following: 1) experimental recording of neurons in the brain and spinal cord of awake behaving rats using Neuropixels and Neuronexus electrodes combined with optogenetics. 2) Analyze the large amount of data generated from these experiments, including tissue processing. 3) Participate in the development of the new theory of motor control.
Rune W. Berg
The lab of Rune W. Berg is looking for a highly motivated and dynamic researcher for a 3-year position to start January 1st, 2024. The topic is the neuroscience of motor control with a focus on locomotion and spinal circuitry and connections with the brain. The person will be performing the following: 1) experimental recording of neurons in the brain and spinal cord of awake behaving rats using Neuropixels and Neuronexus electrodes combined with optogenetics. 2) Analyze the large amount of data generated from these experiments, including tissue processing. 3) Participate in the development of the new theory of motor control.
Go with the visual flow: circuit mechanisms for gaze control during locomotion
Neural mechanisms of rhythmic motor control in Drosophila
All animal locomotion is rhythmic,whether it is achieved through undulatory movement of the whole body or the coordination of articulated limbs. Neurobiologists have long studied locomotor circuits that produce rhythmic activity with non-rhythmic input, also called central pattern generators (CPGs). However, the cellular and microcircuit implementation of a walking CPG has not been described for any limbed animal. New comprehensive connectomes of the fruit fly ventral nerve cord (VNC) provide an opportunity to study rhythmogenic walking circuits at a synaptic scale.We use a data-driven network modeling approach to identify and characterize a putative walking CPG in the Drosophila leg motor system.
Understanding the complex behaviors of the ‘simple’ cerebellar circuit
Every movement we make requires us to precisely coordinate muscle activity across our body in space and time. In this talk I will describe our efforts to understand how the brain generates flexible, coordinated movement. We have taken a behavior-centric approach to this problem, starting with the development of quantitative frameworks for mouse locomotion (LocoMouse; Machado et al., eLife 2015, 2020) and locomotor learning, in which mice adapt their locomotor symmetry in response to environmental perturbations (Darmohray et al., Neuron 2019). Combined with genetic circuit dissection, these studies reveal specific, cerebellum-dependent features of these complex, whole-body behaviors. This provides a key entry point for understanding how neural computations within the highly stereotyped cerebellar circuit support the precise coordination of muscle activity in space and time. Finally, I will present recent unpublished data that provide surprising insights into how cerebellar circuits flexibly coordinate whole-body movements in dynamic environments.
Trackoscope: A low-cost, open, autonomous tracking microscope for long-term observations of microscale organisms
Cells and microorganisms are motile, yet the stationary nature of conventional microscopes impedes comprehensive, long-term behavioral and biomechanical analysis. The limitations are twofold: a narrow focus permits high-resolution imaging but sacrifices the broader context of organism behavior, while a wider focus compromises microscopic detail. This trade-off is especially problematic when investigating rapidly motile ciliates, which often have to be confined to small volumes between coverslips affecting their natural behavior. To address this challenge, we introduce Trackoscope, an 2-axis autonomous tracking microscope designed to follow swimming organisms ranging from 10μm to 2mm across a 325 square centimeter area for extended durations—ranging from hours to days—at high resolution. Utilizing Trackoscope, we captured a diverse array of behaviors, from the air-water swimming locomotion of Amoeba to bacterial hunting dynamics in Actinosphaerium, walking gait in Tardigrada, and binary fission in motile Blepharisma. Trackoscope is a cost-effective solution well-suited for diverse settings, from high school labs to resource-constrained research environments. Its capability to capture diverse behaviors in larger, more realistic ecosystems extends our understanding of the physics of living systems. The low-cost, open architecture democratizes scientific discovery, offering a dynamic window into the lives of previously inaccessible small aquatic organisms.
Modelling the fruit fly brain and body
Through recent advances in microscopy, we now have an unprecedented view of the brain and body of the fruit fly Drosophila melanogaster. We now know the connectivity at single neuron resolution across the whole brain. How do we translate these new measurements into a deeper understanding of how the brain processes sensory information and produces behavior? I will describe two computational efforts to model the brain and the body of the fruit fly. First, I will describe a new modeling method which makes highly accurate predictions of neural activity in the fly visual system as measured in the living brain, using only measurements of its connectivity from a dead brain [1], joint work with Jakob Macke. Second, I will describe a whole body physics simulation of the fruit fly which can accurately reproduce its locomotion behaviors, both flight and walking [2], joint work with Google DeepMind.
Modeling the Navigational Circuitry of the Fly
Navigation requires orienting oneself relative to landmarks in the environment, evaluating relevant sensory data, remembering goals, and convert all this information into motor commands that direct locomotion. I will present models, highly constrained by connectomic, physiological and behavioral data, for how these functions are accomplished in the fly brain.
Computational models of spinal locomotor circuitry
To effectively move in complex and changing environments, animals must control locomotor speed and gait, while precisely coordinating and adapting limb movements to the terrain. The underlying neuronal control is facilitated by circuits in the spinal cord, which integrate supraspinal commands and afferent feedback signals to produce coordinated rhythmic muscle activations necessary for stable locomotion. I will present a series of computational models investigating dynamics of central neuronal interactions as well as a neuromechanical model that integrates neuronal circuits with a model of the musculoskeletal system. These models closely reproduce speed-dependent gait expression and experimentally observed changes following manipulation of multiple classes of genetically-identified neuronal populations. I will discuss the utility of these models in providing experimentally testable predictions for future studies.
The Geometry of Decision-Making
Running, swimming, or flying through the world, animals are constantly making decisions while on the move—decisions that allow them to choose where to eat, where to hide, and with whom to associate. Despite this most studies have considered only on the outcome of, and time taken to make, decisions. Motion is, however, crucial in terms of how space is represented by organisms during spatial decision-making. Employing a range of new technologies, including automated tracking, computational reconstruction of sensory information, and immersive ‘holographic’ virtual reality (VR) for animals, experiments with fruit flies, locusts and zebrafish (representing aerial, terrestrial and aquatic locomotion, respectively), I will demonstrate that this time-varying representation results in the emergence of new and fundamental geometric principles that considerably impact decision-making. Specifically, we find that the brain spontaneously reduces multi-choice decisions into a series of abrupt (‘critical’) binary decisions in space-time, a process that repeats until only one option—the one ultimately selected by the individual—remains. Due to the critical nature of these transitions (and the corresponding increase in ‘susceptibility’) even noisy brains are extremely sensitive to very small differences between remaining options (e.g., a very small difference in neuronal activity being in “favor” of one option) near these locations in space-time. This mechanism facilitates highly effective decision-making, and is shown to be robust both to the number of options available, and to context, such as whether options are static (e.g. refuges) or mobile (e.g. other animals). In addition, we find evidence that the same geometric principles of decision-making occur across scales of biological organisation, from neural dynamics to animal collectives, suggesting they are fundamental features of spatiotemporal computation.
Minute-scale periodic sequences in medial entorhinal cortex
The medial entorhinal cortex (MEC) hosts many of the brain’s circuit elements for spatial navigation and episodic memory, operations that require neural activity to be organized across long durations of experience. While location is known to be encoded by a plethora of spatially tuned cell types in this brain region, little is known about how the activity of entorhinal cells is tied together over time. Among the brain’s most powerful mechanisms for neural coordination are network oscillations, which dynamically synchronize neural activity across circuit elements. In MEC, theta and gamma oscillations provide temporal structure to the neural population activity at subsecond time scales. It remains an open question, however, whether similarly coordination occurs in MEC at behavioural time scales, in the second-to-minute regime. In this talk I will show that MEC activity can be organized into a minute-scale oscillation that entrains nearly the entire cell population, with periods ranging from 10 to 100 seconds. Throughout this ultraslow oscillation, neural activity progresses in periodic and stereotyped sequences. The oscillation sometimes advances uninterruptedly for tens of minutes, transcending epochs of locomotion and immobility. Similar oscillatory sequences were not observed in neighboring parasubiculum or in visual cortex. The ultraslow periodic sequences in MEC may have the potential to couple its neurons and circuits across extended time scales and to serve as a scaffold for processes that unfold at behavioural time scales.
Targeting thalamic circuits rescues motor and mood deficits in PD mice
Although bradykinesia, tremor, and rigidity are hallmark motor defects in Parkinson’s disease (PD) patients, they also experience motor learning impairments and non-motor symptoms such as depression. The neural basis for these different PD symptoms are not well understood. While current treatments are effective for locomotion deficits in PD, therapeutic strategies targeting motor learning deficits and non-motor symptoms are lacking. We found that distinct parafascicular (PF) thalamic subpopulations project to caudate putamen (CPu), subthalamic nucleus (STN), and nucleus accumbens (NAc). While PF-->CPu and PF-->STN circuits are critical for locomotion and motor learning respectively, inhibition of the PF-->NAc circuit induced a depression-like state. While chemogenetically manipulating CPu-projecting PF neurons led to a long-term restoration of locomotion, optogenetic long-term potentiation at PF-->STN synapses restored motor learning behavior in PD model mice. Furthermore, activation of NAc-projecting PF neurons rescued depression-like PD phenotypes. Importantly, we identified nicotinic acetylcholine receptors capable of modulating PF circuits to rescue different PD phenotypes. Thus, targeting PF thalamic circuits may be an effective strategy for treating motor and non-motor deficits in PD.
Versatile treadmill system for measuring locomotion and neural activity in head-fixed mice
Here, we present a protocol for using a versatile treadmill system to measure locomotion and neural activity at high temporal resolution in head-fixed mice. We first describe the assembly of the treadmill system. We then detail surgical implantation of the headplate on the mouse skull, followed by habituation of mice to locomotion on the treadmill system. The system is compact, movable, and simple to synchronize with other data streams, making it ideal for monitoring brain activity in diverse behavioral frameworks. https://dx.doi.org/10.1016/j.xpro.2022.101701
New prospects in shape morphing sheets: unexplored pathways, 4D printing, and autonomous actuation
Living organisms have mastered the dynamic control of stresses within sheets to induce shape transformation and locomotion. For instance, the spatiotemporal pattern of action potential in a heart yields a dynamical stress field leading to shape changes and biological function. Such structures inspired the development of theoretical tools and responsive materials alike. Yet, present attempts to mimic their rich dynamics and phenomenology in autonomous synthetic matter are still very limited. In this talk, I will present several complementing innovations toward this goal: novel shaping mechanisms that were overlooked by previous research, new fabrication techniques for programmable matter via 4D printing of gel structures, and most prominently, the first autonomous shape morphing membranes. The dynamical control over the geometry of the material is a prevalent theme in all of these achievements. In particular, the latter system demonstrates localized deformations, induced by a pattern-forming chemical reaction, that prescribe the patterns of curvature, leading to global shape evolution. Together, these developments present a route for modeling and producing fully autonomous soft membranes mimicking some of the locomotive capabilities of living organisms.
Synergy of color and motion vision for detecting approaching objects in Drosophila
I am working on color vision in Drosophila, identifying behaviors that involve color vision and understanding the neural circuits supporting them (Longden 2016). I have a long-term interest in understanding how neural computations operate reliably under changing circumstances, be they external changes in the sensory context, or internal changes of state such as hunger and locomotion. On internal state-modulation of sensory processing, I have shown how hunger alters visual motion processing in blowflies (Longden et al. 2014), and identified a role for octopamine in modulating motion vision during locomotion (Longden and Krapp 2009, 2010). On responses to external cues, I have shown how one kind of uncertainty in the motion of the visual scene is resolved by the fly (Saleem, Longden et al. 2012), and I have identified novel cells for processing translation-induced optic flow (Longden et al. 2017). I like working with colleagues who use different model systems, to get at principles of neural operation that might apply in many species (Ding et al. 2016, Dyakova et al. 2015). I like work motivated by computational principles - my background is computational neuroscience, with a PhD on models of memory formation in the hippocampus (Longden and Willshaw, 2007).
NMC4 Short Talk: Novel population of synchronously active pyramidal cells in hippocampal area CA1
Hippocampal pyramidal cells have been widely studied during locomotion, when theta oscillations are present, and during short wave ripples at rest, when replay takes place. However, we find a subset of pyramidal cells that are preferably active during rest, in the absence of theta oscillations and short wave ripples. We recorded these cells using two-photon imaging in dorsal CA1 of the hippocampus of mice, during a virtual reality object location recognition task. During locomotion, the cells show a similar level of activity as control cells, but their activity increases during rest, when this population of cells shows highly synchronous, oscillatory activity at a low frequency (0.1-0.4 Hz). In addition, during both locomotion and rest these cells show place coding, suggesting they may play a role in maintaining a representation of the current location, even when the animal is not moving. We performed simultaneous electrophysiological and calcium recordings, which showed a higher correlation of activity between the LFO and the hippocampal cells in the 0.1-0.4 Hz low frequency band during rest than during locomotion. However, the relationship between the LFO and calcium signals varied between electrodes, suggesting a localized effect. We used the Allen Brain Observatory Neuropixels Visual Coding dataset to further explore this. These data revealed localised low frequency oscillations in CA1 and DG during rest. Overall, we show a novel population of hippocampal cells, and a novel oscillatory band of activity in hippocampus during rest.
Neural Population Dynamics for Skilled Motor Control
The ability to reach, grasp, and manipulate objects is a remarkable expression of motor skill, and the loss of this ability in injury, stroke, or disease can be devastating. These behaviors are controlled by the coordinated activity of tens of millions of neurons distributed across many CNS regions, including the primary motor cortex. While many studies have characterized the activity of single cortical neurons during reaching, the principles governing the dynamics of large, distributed neural populations remain largely unknown. Recent work in primates has suggested that during the execution of reaching, motor cortex may autonomously generate the neural pattern controlling the movement, much like the spinal central pattern generator for locomotion. In this seminar, I will describe recent work that tests this hypothesis using large-scale neural recording, high-resolution behavioral measurements, dynamical systems approaches to data analysis, and optogenetic perturbations in mice. We find, by contrast, that motor cortex requires strong, continuous, and time-varying thalamic input to generate the neural pattern driving reaching. In a second line of work, we demonstrate that the cortico-cerebellar loop is not critical for driving the arm towards the target, but instead fine-tunes movement parameters to enable precise and accurate behavior. Finally, I will describe my future plans to apply these experimental and analytical approaches to the adaptive control of locomotion in complex environments.
An optimal population code for global motion estimation in local direction-selective cells
Neuronal computations are matched to optimally encode the sensory information that is available and relevant for the animal. However, the physical distribution of sensory information is often shaped by the animal’s own behavior. One prominent example is the encoding of optic flow fields that are generated during self-motion of the animal and will therefore depend on the type of locomotion. How evolution has matched computational resources to the behavioral constraints of an animal is not known. Here we use in vivo two photon imaging to record from a population of >3.500 local-direction selective cells. Our data show that the local direction-selective T4/T5 neurons in Drosophila form a population code that is matched to represent optic flow fields generated during translational and rotational self-motion of the fly. This coding principle for optic flow is reminiscent to the population code of local direction-selective ganglion cells in the mouse retina, where four direction-selective ganglion cells encode four different axes of self-motion encountered during walking (Sabbah et al., 2017). However, in flies we find six different subtypes of T4 and T5 cells that, at the population level, represent six axes of self-motion of the fly. The four uniformly tuned T4/T5 subtypes described previously represent a local snapshot (Maisak et al. 2013). The encoding of six types of optic flow in the fly as compared to four types of optic flow in mice might be matched to the high degrees of freedom encountered during flight. Thus, a population code for optic flow appears to be a general coding principle of visual systems, resulting from convergent evolution, but matching the individual ethological constraints of the animal.
Locomotion of Helicobacter pylori: Cell geometry and active confinement
Microorganism locomotion in viscoelastic fluids
Many microorganisms and cells function in complex (non-Newtonian) fluids, which are mixtures of different materials and exhibit both viscous and elastic stresses. For example, mammalian sperm swim through cervical mucus on their journey through the female reproductive tract, and they must penetrate the viscoelastic gel outside the ovum to fertilize. In micro-scale swimming the dynamics emerge from the coupled interactions between the complex rheology of the surrounding media and the passive and active body dynamics of the swimmer. We use computational models of swimmers in viscoelastic fluids to investigate and provide mechanistic explanations for emergent swimming behaviors. I will discuss how flexible filaments (such as flagella) can store energy from a viscoelastic fluid to gain stroke boosts due to fluid elasticity. I will also describe 3D simulations of model organisms such as C. Reinhardtii and mammalian sperm, where we use experimentally measured stroke data to separate naturally coupled stroke and fluid effects. We explore why strokes that are adapted to Newtonian fluid environments might not do well in viscoelastic environments.
Locally-ordered representation of 3D space in the entorhinal cortex
When animals navigate on a two-dimensional (2D) surface, many neurons in the medial entorhinal cortex (MEC) are activated as the animal passes through multiple locations (‘firing fields’) arranged in a hexagonal lattice that tiles the locomotion-surface; these neurons are known as grid cells. However, although our world is three-dimensional (3D), the 3D volumetric representation in MEC remains unknown. Here we recorded MEC cells in freely-flying bats and found several classes of spatial neurons, including 3D border cells, 3D head-direction cells, and neurons with multiple 3D firing-fields. Many of these multifield neurons were 3D grid cells, whose neighboring fields were separated by a characteristic distance – forming a local order – but these cells lacked any global lattice arrangement of their fields. Thus, while 2D grid cells form a global lattice – characterized by both local and global order – 3D grid cells exhibited only local order, thus creating a locally ordered metric for space. We modeled grid cells as emerging from pairwise interactions between fields, which yielded a hexagonal lattice in 2D and local order in 3D – thus describing both 2D and 3D grid cells using one unifying model. Together, these data and model illuminate the fundamental differences and similarities between neural codes for 3D and 2D space in the mammalian brain.
Functional consequences of microscopic skin features on snake locomotion
State-dependent egocentric and allocentric heading representation in the monarch butterfly sun compass
For spatial orientation, heading information can be processed in two different frames of reference, a self-centered egocentric or a viewpoint allocentric frame of reference. Using the most efficient frame of reference is in particular important if an animal migrates over large distances, as it the case for the monarch butterfly (Danaus plexippus). These butterflies employ a sun compass to travel over more than 4,000 kilometers to their destination in central Mexico. We developed tetrode recordings from the heading-direction network of tethered flying monarch butterflies that were allowed to orient with respect to a sun stimulus. We show that the neurons switch their frame of reference depending on the animal’s locomotion state. In quiescence, the heading-direction cells encode a sun bearing in an egocentric reference frame, while during active flight, the heading-direction is encoded within an allocentric reference frame. By switching to an allocentric frame of reference during flight, monarch butterflies convert the sun to a global compass cue for long-distance navigation, an ideal strategy for maintaining a migratory heading.
A distinct subcircuit in medial entorhinal cortex mediates learning of interval timing behavior during immobility
Over 60 years of research has established that medial temporal lobe structures, including the hippocampus and entorhinal cortex, are necessary for the formation of episodic memories (i.e. memories of specific personal events that occur in spatial and temporal context). While prior work to establish the neural mechanisms underlying episodic memory has largely focused on questions related spatial context, recently we have begun to investigate how these brain structures could be involved in encoding aspects of temporal context. In particular, we have focused on how medial entorhinal cortex, a structure well known for its role in spatial memory, may also be involved in encoding interval time. To answer this question we have developed an instrumental paradigm for head-fixed mice that requires both immobile interval timing and locomotion-dependent navigation behavior. By combining this behavioral paradigm with large-scale cellular resolution functional imaging and optogenetic-mediated inactivation, our results suggest that MEC is required for learning of interval timing behavior and that interval timing could be mediated through regular, sequential neural activity of a distinct subpopulation of neurons in MEC that encode elapsed time during periods of immobility (Heys and Dombeck, 2018; Heys et al, 2020; Issa et al., 2020). In this talk, I will discuss these findings and discuss our on-going work to investigate the principles underlying the role of medial temporal lobe structures in timing behavior and episodic memory.
Hydrodynamic shape of microorganisms: Generalised Jeffery orbits
'Shape' of microorganisms are diverse. However, we sometimes approximate them as a sphere or a spheroid when we mathematically model the hydrodynamics of motile and non-motile cells. Such a geometrical simplification can be theoretically validated for motions in a linear background flow, since the dynamics, known as the Jeffery orbit, only contain a single geometric parameter, called the Bretherton constant. In this talk, we generalise the Jeffery equations for a chiral axisymmetric object using the low-Reynolds-number hydrokinetic symmetry and then demonstrate that the dynamics of a certain type of chiral object in a fluid flow are characterised by a new chiral parameter in addition to the Bretherton constant. We also discuss how the generalised Jeffery orbits are applied to biased locomotion of bacteria in a bulk shear flow and we will share the idea of hydrodynamic `shape' of microorganisms to simplify the description of their dynamics.
Understanding sensorimotor control at global and local scales
The brain is remarkably flexible, and appears to instantly reconfigure its processing depending on what’s needed to solve a task at hand: fMRI studies indicate that distal brain areas appear to fluidly couple and decouple with one another depending on behavioral context. But the structural architecture of the brain is comprised of long-range axonal projections that are relatively fixed by adulthood. How does the global dynamism evident in fMRI recordings manifest at a cellular level? To bridge the gap between the activity of single neurons and cortex-wide networks, we correlated electrophysiological recordings of individual neurons in primary visual (V1) and retrosplenial (RSP) associational cortex with activity across dorsal cortex, recorded simultaneously using widefield calcium imaging. We found that individual neurons in both cortical areas independently engaged in different distributed cortical networks depending on the animal’s behavioral state, suggesting that locomotion puts cortex into a more sensory driven mode relevant for navigation.
Driving Soft Materials with Magnetic Fields
Magnetic fields exert controllable forces that generate microscopic actuation and locomotion in soft materials with superparamagnetic or ferromagnetic components. I will describe the shape changes and materials parameters required to drive and direct matter including filaments, membranes and hydrogels with magnetic components using precessing magnetic fields
Slow global population dynamics propagating through the medial entorhinal cortex
The medial entorhinal cortex (MEC) supports the brain’s representation of space with distinct cell types whose firing is tuned to features of the environment (grid, border, and object-vector cells) or navigation (head-direction and speed cells). While the firing properties of these functionally-distinct cell types are well characterized, how they interact with one another remains unknown. To determine how activity self-organizes in the MEC network, we tested mice in a spontaneous locomotion task under sensory-deprived conditions. Using 2-photon calcium imaging, we monitored the activity of large populations of MEC neurons in head-fixed mice running on a wheel in darkness, in the absence of external sensory feedback tuned to navigation. We unveiled the presence of motifs that involve the sequential activation of cells in layer II of MEC (MEC-L2). We call these motifs waves. Waves lasted tens of seconds to minutes, were robust, swept through the entire network of active cells and did not exhibit any anatomical organization. Furthermore, waves did not map the position of the mouse on the wheel and were not restricted to running epochs. The majority of MEC-L2 neurons participate in this global sequential dynamics, that ties all functional cell types together. We found the waves in the most lateral region of MEC, but not in adjacent areas such as PaS or in a sensory cortex such as V1.
Multistable structures - from deployable structures to robots
Multistable structures can reversibly change between multiple stable configurations when a sufficient energetic input is provided. While originally the field focused on understanding what governs the snapping, more recently it has been shown that these systems also provide a powerful platform to design a wide range of smart structures. In this talk, I will first show that pressure-deployable origami structures characterized by two stable configurations provide opportunities for a new generation of large-scale inflatable structures that lock in place after deployment and provide a robust enclosure through their rigid faces. Then, I will demonstrate that the propagation of transition waves in a bistable one-dimensional linkage can be exploited as a robust mechanism to realize structures that can be quickly deployed. Finally, while in the first two examples multistability is harnessed to realize deployable architectures, I will demonstrate that bistable building blocks can also be exploited to design crawling and jumping robots. Unlike previously proposed robots that require complex input control of multiple actuators, a simple, slow input signal suffices to make our system move, as all features required for locomotion are embedded into the architecture of the building blocks.
Surprises in self-deforming self-propelling systems
From slithering snakes, to entangling robots, self-deforming (shape changing) active systems display surprising dynamics. This is particularly true when such systems interact with environments or other agents to generate self-propulsion (movement). In this talk, I will discuss a few projects from my group illustrating unexpected effects in individual and collectives of self-deformers. For example, snakes and snake-like robots mechanically “diffract” from fixed environmental heterogeneities, collections of smart-active robots (smarticles) can locomote (and phototax) as a collective despite individual immobility, and geometrically actively entangling ensembles of blackworms and robots can self-propel as a unit to thermo or phototax without centralized control.
An evolutionarily conserved hindwing circuit mediates Drosophila flight control
My research at the interface of neurobiology, biomechanics, and behavior seeks to understand how the timing precision of sensory input structures locomotor output. My lab studies the flight behavior of the fruit fly, Drosophila melanogaster, combining powerful genetic tools available for labeling and manipulating neural circuits with cutting-edge imaging in awake, behaving animals. This work has the potential to fundamentally reshape understanding of the evolution of insect flight, as well as highlight the tremendous importance of timing in the context of locomotion. Timing is crucial to the nervous system. The ability to rapidly detect and process subtle disturbances in the environment determines whether an animal can attain its next meal or successfully navigate complex, unpredictable terrain. While previous work on various animals has made tremendous strides uncovering the specialized neural circuits used to resolve timing differences with sub-microsecond resolution, it has focused on the detection of timing differences in sensory systems. Understanding of how the timing of motor output is structured by precise sensory input remains poor. My research focuses on an organ unique to fruit flies, called the haltere, that serves as a bridge for detecting and acting on subtle timing differences, helping flies execute rapid maneuvers. Understanding how this relatively simple insect canperform such impressive aerial feats demands an integrative approach that combines physics, muscle mechanics, neuroscience, and behavior. This unique, powerful approach will reveal the general principles that govern sensorimotor processing.
The complexity of the ordinary – neural control of locomotion
Today, considerable information is available on the organization and operation of the neural networks that generate the motor output for animal locomotion, such as swimming, walking, or flying. In recent years, the question of which neural mechanisms are responsible for task-specific and flexible adaptations of locomotor patterns has gained increased attention in the field of motor control. I will report on advances we made with respect to this topic for walking in insects, i.e. the leg muscle control system of phasmids and fruit flies. I will present insights into the neural basis of speed control, heading, walking direction, and the role of ground contact in insect walking, both for local control and intersegmental coordination. For these changes in motor activity modifications in the processing of sensory feedback signals play a pivotal role, for instance for movement and load signals in heading and curve walking or for movement signals that contribute to intersegmental coordination. Our recent findings prompt future investigations that aim to elucidate the mechanisms by which descending and intersegmental signals interact with local networks in the generation of motor flexibility during walking in animals.
How the brain comes to balance: Development of postural stability and its neural architecture in larval zebrafish
Maintaining posture is a vital challenge for all freely-moving organisms. As animals grow, their relationship to destabilizing physical forces changes. How does the nervous system deal with this ongoing challenge? Vertebrates use highly conserved vestibular reflexes to stabilize the body. We established the larval zebrafish as a new model system to understand the development of the vestibular reflexes responsible for balance. In this talk, I will begin with the biophysical challenges facing baby fish as they learn to swim. I’ll briefly review published work by David Ehrlich, Ph.D., establishing a fundamental relationship between postural stability and locomotion. The bulk of the talk will highlight unpublished work by Kyla Hamling. She discovered that a small (~50) population of molecularly-defined brainstem neurons called vestibulo-spinal cells act as a nexus for postural development. Her loss-of-function experiments show that these neurons contribute more to postural stability as animals grow older. I’ll end with brief highlights from her ongoing work examining tilt-evoked responses of these neurons using 2-photon imaging and the consequences of downstream activity in the spinal cord using single-objective light-sheet (SCAPE) microscopy
Neural mechanisms of proprioception and motor control in Drosophila
Animals rely on an internal sense of body position and movement to effectively control motor behaviour. This sense of proprioception is mediated by diverse populations of internal mechanosensory neurons distributed throughout the body. My lab is trying to understand how proprioceptive stimuli are detected by sensory neurons, integrated and transformed in central circuits, and used to guide motor output. We approach these questions using genetic tools, in vivo two-photon imaging, and patch-clamp electrophysiology in Drosophila. We recently found that the axons of fly leg proprioceptors are organized into distinct functional projections that contain topographic representations of specific kinematic features: one group of axons encodes tibia position, another encodes movement direction, and a third encodes bidirectional movement and vibration frequency. Whole-cell recordings from downstream neurons reveal that position, movement, and directional information remain segregated in central circuits. These feedback signals then converge upon motor neurons that control leg muscles during walking. Overall, our findings reveal how a low-dimensional stimulus – the angle of a single leg joint – is encoded by a diverse population of mechanosensory neurons. Specific proprioceptive parameters are initially processed by parallel pathways, but are ultimately integrated to influence motor output. This architecture may help to maximize information transmission, processing speed, and robustness, which are critical for feedback control of the limbs during adaptive locomotion.
Utilizing Random Forest for Multivariate Analysis: Exploring the Influence of Dopaminergic Neurons on Drosophila Larvae Locomotion
Bernstein Conference 2024
Faithful encoding of interlimb coordination by individual Purkinje cells during locomotion
COSYNE 2022
Cerebellar interneurons encode single steps in locomotion
COSYNE 2023
Data-driven discovery of long timescale behavioral strategies during sensory evoked locomotion
COSYNE 2023
Locomotion is associated with straighter neural trajectories for natural movies in mouse visual cortex
COSYNE 2023
A data-driven biomechanical modeling and optimization pipeline for studying salamander locomotions
COSYNE 2025
Information-preserving modulation as a principle of sensory coding during locomotion across species
COSYNE 2025
Neural circuit architectural priors for quadruped locomotion
COSYNE 2025
A spiking neuromechanical model of the zebrafish to investigate the role of axial proprioceptive sensory feedback during locomotion
COSYNE 2025
Activity of corticospinal neurons during locomotion in mice
FENS Forum 2024
Astrocytic calcium response to locomotion in mouse somatosensory cortex: Heterogeneity, reproducibility, and subcellular integration
FENS Forum 2024
Behavioral impacts of simulated microgravity on male mice: Locomotion, social interactions and memory in a novel object recognition task
FENS Forum 2024
Cerebellar population activity during mouse locomotion
FENS Forum 2024
Closed-loop control of quadrupedal mouse locomotion over uneven terrain: A neuromechanical modeling study
FENS Forum 2024
Comparison of locomotion speed during different cognitive and motor tasks in subjects with Parkinson's disease
FENS Forum 2024
Dynamic mechanism of adaptive interlimb coordination in cat locomotion
FENS Forum 2024
From anatomy to functions in locomotion: An optogenetic investigation on the organisation of V2a-derived reticulospinal neurons
FENS Forum 2024
Hindlimb muscle synergies during split-belt locomotion in the cat: Implications for CPG pattern formation organization
FENS Forum 2024
The influence of locomotion on visual tuning of neurons in the superficial superior colliculus of mice
FENS Forum 2024
The influence of locomotion on visual tuning of neurons in the superficial superior colliculus of mice
FENS Forum 2024
Leriglitazone improves anxiety behavior and locomotion in a mouse model of type 2 spastic paraplegia
FENS Forum 2024
Locomotion induced by medial septal glutamatergic neurons is linked to intrinsically generated persistent firing
FENS Forum 2024
Locomotion modulates visual adaptation in the mouse superior colliculus
FENS Forum 2024
Metabolic response of cortical neurons, astrocytes, and blood vessels to locomotion
FENS Forum 2024
Pauses in movement unveil a spinal continuous attractor that generates locomotion
FENS Forum 2024
Predictive processing of tactile sensory information in mice engaged in a locomotion task
FENS Forum 2024
The role of afferent feedback in adaptive interlimb coordination in cat locomotion
FENS Forum 2024
Role of dopamine in the modulation of MK801-enhanced hyperlocomotion and high-frequency oscillations in the rat olfactory bulb
FENS Forum 2024
Serotonergic neurons of the caudal raphe contribute to sensory processing during adaptive locomotion
FENS Forum 2024
The spatial projectome of spinal neurons provides a new model of locomotion
FENS Forum 2024
Specific ablation of hippocampal theta activity during locomotion impairs learning
FENS Forum 2024
Substrate mechanosensation in locomotion of C. elegans
FENS Forum 2024
Locomotion speed is encoded in superficial layers of mouse V1 with a non-uniform distribution biased towards layer 4
Neuromatch 5