Inferring stochastic low-rank recurrent neural networks from neural data
Matthijs Pals, A Sağtekin, Felix Pei, Manuel Gloeckler, Jakob Macke · Bernstein Conference 2024
A central aim in computational neuroscience is to relate the activity of large populations of neurons to an underlying dynamical system. Models of these neural dynamics should ideally be both interpretable and fit the observed data well. Low-rank recurrent neural networks (RNNs) exhibit such interpretability by having tractable dynamics. However, it is unclear how to best fit low-rank RNNs to data consisting of noisy observations of an underlying stochastic system. Here, we propose to fit stochastic low-rank RNNs with variational sequential Monte Carlo methods. We validate our method on severa