Neuroscience seminars
July 2023
Learning representations of specifics and generalities over time
Anna Schapiro· University of Pennsylvania
Wed, Jul 12 · 13:00 UTC
Alternative careers for neuroscience PhDs
Patrick Mineault, Ashley Juavinett, Matt Kelley· xcorr consulting ;; UC San Diego ;; Pfizer
Thu, Jul 6 · 17:00 UTC
Series: WWNeuRiseVideo
June 2023
In vivo direct imaging of neuronal activity at high temporospatial resolution
Jang-Yeon Park· Sungkyunkwan University, Suwon, Korea
Wed, Jun 28 · 16:00 UTC
Advanced noninvasive neuroimaging methods provide valuable information on the brain function, but they have obvious pros and cons in terms of temporal and spatial resolution. Functional magnetic resonance imaging (fMRI) using blood-oxygenation-level-dependent (BOLD) effect provides good spatial resolution in the order of millimeters, but has a poor temporal resolution in the order of seconds due to slow hemodynamic responses to neuronal activation, providing indirect information on neuronal activity. In contrast, electroencephalography (EEG) and magnetoencephalography (MEG) provide excellent temporal resolution in the millisecond range, but spatial information is limited to centimeter scales. Therefore, there has been a longstanding demand for noninvasive brain imaging methods capable of detecting neuronal activity at both high temporal and spatial resolution. In this talk, I will introduce a novel approach that enables Direct Imaging of Neuronal Activity (DIANA) using MRI that can dynamically image neuronal spiking activity in milliseconds precision, achieved by data acquisition scheme of rapid 2D line scan synchronized with periodically applied functional stimuli. DIANA was demonstrated through in vivo mouse brain imaging on a 9.4T animal scanner during electrical whisker-pad stimulation. DIANA with milliseconds temporal resolution had high correlations with neuronal spike activities, which could also be applied in capturing the sequential propagation of neuronal activity along the thalamocortical pathway of brain networks. In terms of the contrast mechanism, DIANA was almost unaffected by hemodynamic responses, but was subject to changes in membrane potential-associated tissue relaxation times such as T2 relaxation time. DIANA is expected to break new ground in brain science by providing an in-depth understanding of the hierarchical functional organization of the brain, including the spatiotemporal dynamics of neural networks.
What does a neuron do? A new model for Neuroscience and AI
Mitya Chklovskii· Flatiron Institute and NYU Medical Center
Wed, Jun 28 · 15:00 UTC
The traditional view of a neuron as a feature detector or an efficient encoder has difficulties in explaining the function of motor neurons and experimentally observed variable and context-dependent response properties of neurons. We put forward an alternative perspective, modeling each neuron as a feedback controller within a closed loop that includes other neurons and the external environment. Based on the recently developed Direct Data-Driven Control (DD-DC) approach, we propose a biologically plausible controller which implicitly identifies the dynamics of the rest of the loop, infers its latent state and optimizes control. The DD-DC model of a neuron accounts for multiple neurophysiological observations, including the switch from potentiation to depression in Spike-Timing-Dependent Plasticity (STDP) and its asymmetry; temporally extended feedforward and feedback neuronal filters and their adaptation to input statistics; imprecision of the neuronal spike-generation mechanism under constant input; as well as the prevalence of variability and/or noise in brain operation. The DD-DC neuron offers an alternative to the feedforward, instantaneously responding McCulloch-Pitts-Rosenblatt unit as a primitive for constructing biologically-inspired neural networks. Presented in the van Vreeswijk Theoretical Neuroscience Seminar series (formerly WWTNS) on 2023-06-28. Recording duration: 00:52:20.
Computational NeuroscienceDynamical SystemsSeries: van Vreeswijk Theoretical Neuroscience SeminarVideo+1 more
Light-driven dopamine release in the adult and developing retina
Morven Cameron· Western Sydney University
Mon, Jun 26 · 08:00 UTC
Three-factor rules of synaptic plasticity: from reward to surprise
Wulfram Gerstner· EPF Lausanne, Switzerland
Thu, Jun 22 · 16:15 UTC
Freeze or flee ? New insights from rodent models of autism
Sumantra “Shona” Chattarji· Director, CHINTA, TCG Centres for Research and Education in Science & Technology, Kolkata, India & Visiting Professor, Simons Initiative for the Developing Brain, University of Edinburgh, UK
Thu, Jun 22 · 16:00 UTC
Individuals afflicted with certain types of autism spectrum disorder often exhibit impaired cognitive function alongside enhanced emotional symptoms and mood lability. However, current understanding of the pathogenesis of autism and intellectual disabilities is based primarily on studies in the hippocampus and cortex, brain areas involved in cognitive function. But, these disorders are also associated with strong emotional symptoms, which are likely to involve changes in the amygdala and other brain areas. In this talk I will highlight these issues by presenting analyses in rat models of ASD/ID lacking Nlgn3 and Frm1 (causing Fragile X Syndrome). In addition to identifying new circuit and cellular alterations underlying divergent patterns of fear expression, these findings also suggest novel therapeutic strategies.
From pecking order to ketamine - neural mechanism of social and emotional behavior
Hailan Hu· Zhejiang University School of Medicine, Hangzhou, China
Thu, Jun 22 · 12:15 UTC
Emotions and social interactions color our lives and shape our behaviors. Using animal models and engineered manipulations, we aim to understand how social and emotional behaviors are encoded in the brain, focusing on the neural circuits underlying dominance hierarchy and depression. This lecture will highlight our recent discoveries on how downward social mobility leads to depression; how ketamine tames depression by blocking burst firing in the brain’s antireward center; and, how glia-neuron interaction plays a surprising role in this process. I will also present our recent work on the mechanism underlying the sustained antidepressant activity of ketamine and its brain region specificity. With these results, we hope to illuminate on a more unified theory on ketamine’s mode of action and inspire new treatment strategies for depression.
From pecking order to ketamine - neural mechanism of social and emotional behavior
Hailan Hu· Zhejiang University School of Medicine, Hangzhou, China
Wed, Jun 21 · 16:00 UTC
Emotions and social interactions color our lives and shape our behaviors. Using animal models and engineered manipulations, we aim to understand how social and emotional behaviors are encoded in the brain, focusing on the neural circuits underlying dominance hierarchy and depression. This lecture will highlight our recent discoveries on how downward social mobility leads to depression; how ketamine tames depression by blocking burst firing in the brain’s antireward center; and, how glia-neuron interaction plays a surprising role in this process. I will also present our recent work on the mechanism underlying the sustained antidepressant activity of ketamine and its brain region specificity. With these results, we hope to illuminate on a more unified theory on ketamine’s mode of action and inspire new treatment strategies for depression.
Representational Connectivity Analysis (RCA): a Method for Investigating Flow of Content-Specific Information in the Brain
Hamid Karimi-Rouzbahani· Mater Research, Australia
Wed, Jun 21 · 09:30 UTC
Representational Connectivity Analysis (RCA) has gained mounting interest in the past few years. This is because, rather than conventional tracking of signal, RCA allows for the tracking of information across the brain. It can also provide insights into the content and potential transformations of the transferred information. This presentation explains several variations of the method in terms of implementation and how it can be adopted for different modalities (E/MEG and fMRI). I will also present caveats and nuances of the method which should be considered when using the RCA.
Why “pauses” matter: breaks in respiratory behavior orchestrate piriform network dynamics
Lisa Roux· University of Bordeaux
Mon, Jun 19 · 11:00 UTC
Dynamical SystemsSeries: NeuroLeman Network
The Bernstein Student Workshop Series is an initiative of the student members of the Bernstein Network. It provides a unique opportunity to enhance the technical exchange on a peer-to-peer basis. The series is motivated by the idea of bridging the gap between theoretical and experimental neuroscience by bringing together methodological expertise in the network. Unlike conventional workshops, a talented junior scientist will first give a tutorial about a specific theoretical or experimental technique, and then give a talk about their own research to demonstrate how the technique helps to address neuroscience questions. The workshop series is designed to cover a wide range of theoretical and experimental techniques and to elucidate how different techniques can be applied to answer different types of neuroscience questions. Combining the technical tutorial and the research talk, the workshop series aims to promote knowledge sharing in the community and enhance in-depth discussions among students from diverse backgrounds.
Movement planning as a window into hierarchical motor control
Katja Kornysheva· Centre for Human Brain (CHBH) at the University of Birmingham, UK
Thu, Jun 15 · 13:00 UTC
The ability to organise one's body for action without having to think about it is taken for granted, whether it is handwriting, typing on a smartphone or computer keyboard, tying a shoelace or playing the piano. When compromised, e.g. in stroke, neurodegenerative and developmental disorders, the individuals’ study, work and day-to-day living are impacted with high societal costs. Until recently, indirect methods such as invasive recordings in animal models, computer simulations, and behavioural markers during sequence execution have been used to study covert motor sequence planning in humans. In this talk, I will demonstrate how multivariate pattern analyses of non-invasive neurophysiological recordings (MEG/EEG), fMRI, and muscular recordings, combined with a new behavioural paradigm, can help us investigate the structure and dynamics of motor sequence control before and after movement execution. Across paradigms, participants learned to retrieve and produce sequences of finger presses from long-term memory. Our findings suggest that sequence planning involves parallel pre-ordering of serial elements of the upcoming sequence, rather than a preparation of a serial trajectory of activation states. Additionally, we observed that the human neocortex automatically reorganizes the order and timing of well-trained movement sequences retrieved from memory into lower and higher-level representations on a trial-by-trial basis. This echoes behavioural transfer across task contexts and flexibility in the final hundreds of milliseconds before movement execution. These findings strongly support a hierarchical and dynamic model of skilled sequence control across the peri-movement phase, which may have implications for clinical interventions.
Quantifying perturbed SynGAP1 function caused by coding mutations
Michael Courtney, PhD· Turku Bioscience
Thu, Jun 15 · 00:00 UTC
Computational models of spinal locomotor circuitry
Simon Danner· Drexel University, Philadelphia, USA
Wed, Jun 14 · 10:00 UTC
To effectively move in complex and changing environments, animals must control locomotor speed and gait, while precisely coordinating and adapting limb movements to the terrain. The underlying neuronal control is facilitated by circuits in the spinal cord, which integrate supraspinal commands and afferent feedback signals to produce coordinated rhythmic muscle activations necessary for stable locomotion. I will present a series of computational models investigating dynamics of central neuronal interactions as well as a neuromechanical model that integrates neuronal circuits with a model of the musculoskeletal system. These models closely reproduce speed-dependent gait expression and experimentally observed changes following manipulation of multiple classes of genetically-identified neuronal populations. I will discuss the utility of these models in providing experimentally testable predictions for future studies.
Translational Research in Tuberous Sclerosis as a Model for Autism and Epilepsy
Mustafa Sahin· Boston Children's Hospital & Harvard University
Wed, Jun 14 · 05:00 UTC
Learning to Express Reward Prediction Error-like Dopaminergic Activity Requires Plastic Representations of Time
Harel Shouval· The University of Texas at Houston
Wed, Jun 14 · 05:00 UTC
The dominant theoretical framework to account for reinforcement learning in the brain is temporal difference (TD) reinforcement learning. The TD framework predicts that some neuronal elements should represent the reward prediction error (RPE), which means they signal the difference between the expected future rewards and the actual rewards. The prominence of the TD theory arises from the observation that firing properties of dopaminergic neurons in the ventral tegmental area appear similar to those of RPE model-neurons in TD learning. Previous implementations of TD learning assume a fixed temporal basis for each stimulus that might eventually predict a reward. Here we show that such a fixed temporal basis is implausible and that certain predictions of TD learning are inconsistent with experiments. We propose instead an alternative theoretical framework, coined FLEX (Flexibly Learned Errors in Expected Reward). In FLEX, feature specific representations of time are learned, allowing for neural representations of stimuli to adjust their timing and relation to rewards in an online manner. In FLEX dopamine acts as an instructive signal which helps build temporal models of the environment. FLEX is a general theoretical framework that has many possible biophysical implementations. In order to show that FLEX is a feasible approach, we present a specific biophysically plausible model which implements the principles of FLEX. We show that this implementation can account for various reinforcement learning paradigms, and that its results and predictions are consistent with a preponderance of both existing and reanalyzed experimental data.
How curiosity affects learning and information seeking via the dopaminergic circuit
Matthias J. Gruber· Cardiff University, UK
Tue, Jun 13 · 13:30 UTC
Over the last decade, research on curiosity – the desire to seek new information – has been rapidly growing. Several studies have shown that curiosity elicits activity within the dopaminergic circuit and thereby enhances hippocampus-dependent learning. However, given this new field of research, we do not have a good understanding yet of (i) how curiosity-based learning changes across the lifespan, (ii) why some people show better learning improvements due to curiosity than others, and (iii) whether lab-based research on curiosity translates to how curiosity affects information seeking in real life. In this talk, I will present a series of behavioural and neuroimaging studies that address these three questions about curiosity. First, I will present findings on how curiosity and interest affect learning differently in childhood and adolescence. Second, I will show data on how inter-individual differences in the magnitude of curiosity-based learning depend on the strength of resting-state functional connectivity within the cortico-mesolimbic dopaminergic circuit. Third, I will present findings on how the level of resting-state functional connectivity within this circuit is also associated with the frequency of real-life information seeking (i.e., about Covid-19-related news). Together, our findings help to refine our recently proposed framework – the Prediction, Appraisal, Curiosity, and Exploration (PACE) framework – that attempts to integrate theoretical ideas on the neurocognitive mechanisms of how curiosity is elicited, and how curiosity enhances learning and information seeking. Furthermore, our findings highlight the importance of curiosity research to better understand how curiosity can be harnessed to improve learning and information seeking in real life.
Human and Zebrafish retinal circuits: similarities in day and night
Takeshi Yoshimatsu· University of Washington, St. Louis
Mon, Jun 12 · 14:00 UTC
Therapeutic Strategies for Autism: Targeting Three Levels of the Central Dogma of Molecular Biology with a Focus on SYNGAP1
Prof. Lilia Iakoucheva, PhD, Mr. Derek Hong, MS· UCSD School of Medicine
Thu, Jun 8 · 00:00 UTC