Reconstructing ocean life: metagenome-assembled genomes in marine research
Bio-Informatics, Computational Genomics, Genomics and seminar by Samuel Miravet-Verde, Ekaterina Sakharova and Alexander Sczyrba, ETH Zürich; EMBL-EBI; Bielefeld University, Centrum for Biotechnology (CeBiTec)
Friday 11:00–12:30 London (GMT+1)
Ended
Abstract
This webinar examines reconstruction and use of marine metagenome-assembled genomes. The first part introduces the Ocean Microbiomics Database as a standardized resource for prokaryotic genome-resolved analysis, including co-abundance-based reconstruction, contextual metadata, and relationships between ecological patterns and microbial genomes. The second part considers why eukaryotic genomes are harder to recover: their complexity, low abundance, and limited markers and reference sequences complicate assembly and classification. Participants will compare reconstruction approaches, explore the database, and consider tools and steps for recovering eukaryotic genomes. The session serves academic and industrial researchers developing marine-microbiome applications and infrastructure teams managing samples, data, and discovery resources.
Topics
Show 2 more topics
Related seminars
- Nov 12, 2026Evgeny Glazov, Kara Dicks and Steven Robbins, Oxford Nanopore Technologies
More from EMBL-EBI
All talksAutomated X-ray fragment and ligand screening for therapeutic innovation in infection biology
Oct 28, 2026José MárquezFrom mutations to mechanisms: using AlphaFold 2 to decode gentamicin resistance
Nov 3, 2026Razan Abbara